RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 RAD51CO43502 376 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 BANF1O75531 89 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 URI1O94763 535 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 TRIM16O95361 564 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 GP1BAP07359 652 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 MLNP12872 115 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 BRAFP15056 766 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 RPIAP49247 311 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 SARNPP82979 210 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 GTF2H3Q13889 308 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 DHX34Q14147 1143 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 SMAD1Q15797 465 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 INSCQ1MX18 579 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 BCL7AQ4VC05 210 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 IYDQ6PHW0 289 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 AFTPHQ6ULP2 937 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 TMPRSS7Q7RTY8 843 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 ZNF572Q7Z3I7 529 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 LDB1Q86U70 411 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 LILRA3Q8N6C8 439 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 OR4L1Q8NH43 312 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 SLC37A2Q8TED4 501 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 PEX13Q92968 403 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 TRIM44Q96DX7 344 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 SGSM3Q96HU1 749 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 RUNDC3BQ96NL0 473 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 CCDC3Q9BQI4 270 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 TIMM29Q9BSF4 260 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 TRIM31Q9BZY9 425 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 ZCCHC2Q9C0B9 1178 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 OSGEPL1Q9H4B0 414 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 MRM3Q9HC36 420 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 XAB2Q9HCS7 855 aaKnown RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 LRIT1Q9P2V4 623 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 CDC23Q9UJX2 597 aa10.3□□□□□ -0.76
UBE2F-213ENST00000439780 COL27A1Q8IZC6 1860 aaPredicted RBP10.3□□□□□ -0.76
UBE2F-213ENST00000439780 PRAMEF33A0A0G2JMD5 474 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 FAM221BA6H8Z2 402 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 GOLGA8KD6RF30 607 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 GOLGA8TH3BQL2 631 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 B4GAT1O43505 415 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 OR1I1O60431 355 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 VAPBO95292 243 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 F3P13726 295 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ATP1B2P14415 290 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 GLB1P16278 677 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 RPL10P27635 214 aaKnown RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 RPL21P46778 160 aaKnown RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ARCN1P48444 511 aaKnown RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 PRLHRP49683 370 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ITGA8P53708 1063 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 DRG2P55039 364 aaKnown RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 PRAMEP78395 509 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 CCL7P80098 99 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 SHC2P98077 582 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 E2F1Q01094 437 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 NFE2L1Q14494 772 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 SEPT7Q16181 437 aaKnown RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ANKRD20A4Q4UJ75 823 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ZNF658BQ4V348 819 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 HES3Q5TGS1 186 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 CDCP2Q5VXM1 449 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 HIBCHQ6NVY1 386 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ZNF438Q7Z4V0 828 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 HOOK3Q86VS8 718 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 AMZ2Q86W34 360 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 IGDCC3Q8IVU1 814 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 SFRP1Q8N474 314 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 Q8N9G6 341 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 MAPK15Q8TD08 544 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 NAT6Q93015 286 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 DCUN1D1Q96GG9 259 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 IL1RAPL1Q9NZN1 696 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ZNF624Q9P2J8 865 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 SNX24Q9Y343 169 aa10.29□□□□□ -0.76
UBE2F-213ENST00000439780 DNMT3AQ9Y6K1 912 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-213ENST00000439780 ZCWPW2A0A1B0GU75 182 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 FAM237BA0A1B0GVD1 139 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 A0A1W2PQM1 296 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 MGAT4DA6NG13 374 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 EFCAB8A8MWE9 144 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 NTN3O00634 580 aaPredicted RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 CD3EAPO15446 510 aaKnown RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 NUDT21O43809 227 aaKnown RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 SEC31AO94979 1220 aaKnown RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 MT-CO3P00414 261 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 CDK4P11802 303 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 SLC19A1P41440 591 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 OR1D5P58170 312 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 UBE2IP63279 158 aaKnown RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 DMPKQ09013 629 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 TARDBPQ13148 414 aaKnown RBP eCLIP10.28□□□□□ -0.76
UBE2F-213ENST00000439780 CAMK2BQ13554 666 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 ITIH4Q14624 930 aa10.28□□□□□ -0.76
UBE2F-213ENST00000439780 CLCA4Q14CN2 919 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms