RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SEMA4BQ9NPR2 832 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-202ENST00000439724 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
SMAD3-202ENST00000439724 SMOXQ9NWM0 555 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 DKK3Q9UBP4 350 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 CDH22Q9UJ99 828 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PRPF19Q9UMS4 504 aaKnown RBP11.63□□□□□ -0.55
SMAD3-202ENST00000439724 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
SMAD3-202ENST00000439724 NCF1BA6NI72 391 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 NCF1CA8MVU1 366 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 EIF3FO00303 357 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 E2F3O00716 465 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 AIM2O14862 343 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 RAD51BO15315 384 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 VPS4BO75351 444 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 GPC4O75487 556 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 LEFTY1O75610 366 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 TRIM16O95361 564 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 ESRRBO95718 433 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 CBSLP0DN79 551 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 NCF1P14598 390 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 CD1EP15812 388 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 CBSP35520 551 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 AGTR2P50052 363 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 NUDT2P50583 147 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 FOXA1P55317 472 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 IRX1P78414 480 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 SEMG2Q02383 582 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 ARHGEF7Q14155 803 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 PPP1R3AQ16821 1122 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 TTLL9Q3SXZ7 439 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 ATP13A5Q4VNC0 1218 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 C1orf146Q5VVC0 180 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 FRA10AC1Q70Z53 315 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 ETFBKMTQ8IXQ9 262 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 C12orf76Q8N812 135 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 KYQ8NBH2 561 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 BPIFB1Q8TDL5 484 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 SORCS1Q8WY21 1168 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 STMN2Q93045 179 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 C3orf30Q96M34 536 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 ZNF382Q96SR6 550 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 COPS8Q99627 209 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 FAM126AQ9BYI3 521 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 RAD18Q9NS91 495 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 KCTD5Q9NXV2 234 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 IL36AQ9UHA7 158 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 OARD1Q9Y530 152 aa11.62□□□□□ -0.55
SMAD3-202ENST00000439724 TNPO3Q9Y5L0 923 aaKnown RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 MUC22E2RYF6 1773 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-202ENST00000439724 H0Y3Z8 333 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 PIP5K1BO14986 540 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 TULP3O75386 442 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 KRT36O76013 467 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ANP32DO95626 131 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 NFATC1O95644 943 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 S100BP04271 92 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 UROSP10746 265 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ITGB6P18564 788 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 GCKP35557 465 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ACADVLP49748 655 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 MTTPP55157 894 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 PKNOX1P55347 436 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 KCNC3Q14003 757 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 FASTKQ14296 549 aaKnown RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 RCN1Q15293 331 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ZNF805Q5CZA5 627 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ARSIQ5FYB1 569 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 FAM78AQ5JUQ0 283 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 TMC5Q6UXY8 1006 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 RFLNAQ6ZTI6 216 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 DPPA4Q7L190 304 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 SYVN1Q86TM6 617 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 C12orf40Q86WS4 652 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 MYLK4Q86YV6 388 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 PHYKPLQ8IUZ5 450 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 DSELQ8IZU8 1212 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 PGAM4Q8N0Y7 254 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 HMGCLL1Q8TB92 370 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 RCN3Q96D15 328 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 ASB16Q96NS5 453 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 HGH1Q9BTY7 390 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 TUBB1Q9H4B7 451 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 EFCAB1Q9HAE3 211 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 OBP2AQ9NY56 170 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 STX18Q9P2W9 335 aaKnown RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 EIF2B4Q9UI10 523 aaKnown RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
SMAD3-202ENST00000439724 KIAA1549LQ6ZVL6 1849 aa11.61□□□□□ -0.55
SMAD3-202ENST00000439724 A0A1B0GTL3 188 aa11.6□□□□□ -0.55
SMAD3-202ENST00000439724 PSMD12O00232 456 aaPredicted RBP11.6□□□□□ -0.55
SMAD3-202ENST00000439724 FFAR2O15552 330 aa11.6□□□□□ -0.55
SMAD3-202ENST00000439724 CRCPO75575 148 aa11.6□□□□□ -0.55
SMAD3-202ENST00000439724 CTSLP07711 333 aa11.6□□□□□ -0.55
SMAD3-202ENST00000439724 OR56A5P0C7T3 313 aa11.6□□□□□ -0.55
SMAD3-202ENST00000439724 ENO3P13929 434 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms