RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CLCNKAP51800 687 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 ITGA8P53708 1063 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 CLDN6P56747 220 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 ILKQ13418 452 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 HLTFQ14527 1009 aaKnown RBP eCLIP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 MAATS1Q7Z4T9 603 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 RAB44Q7Z6P3 723 aaPredicted RBP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 HEXDCQ8WVB3 486 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 SIGLEC10Q96LC7 697 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 PRDM8Q9NQV8 689 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 SAMD15Q9P1V8 674 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 SNX24Q9Y343 169 aa19.17■□□□□ 0.66
SEMA3B-206ENST00000439487 EPG5Q9HCE0 2579 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 KMT2BQ9UMN6 2715 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 IGLV3-16A0A075B6K0 115 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 CFAP99D6REC4 459 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 HYAL3O43820 417 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 PMLP29590 882 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 RPL21P46778 160 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 SEMA3AQ14563 771 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 MORF4L2Q15014 288 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 SMAD1Q15797 465 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 WHAMMP3Q1A5X7 153 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 FASTKD1Q53R41 847 aaKnown RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 HIBCHQ6NVY1 386 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 AMZ2Q86W34 360 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 C17orf82Q86X59 251 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 ARL14Q8N4G2 192 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 CCDC74AQ96AQ1 378 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 SNF8Q96H20 258 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 ZNF514Q96K75 400 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 PWWP2AQ96N64 755 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 RABGEF1Q9UJ41 708 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 MAD1L1Q9Y6D9 718 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 DNMT3AQ9Y6K1 912 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 RNF215Q9Y6U7 377 aa19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 COL27A1Q8IZC6 1860 aaPredicted RBP19.16■□□□□ 0.66
SEMA3B-206ENST00000439487 MAGEB16A2A368 324 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 PRR19A6NJB7 356 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 CASC3O15234 703 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 BANF1O75531 89 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 SEC31AO94979 1220 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 VAPBO95292 243 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 GP1BAP07359 652 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 SPINK2P20155 84 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 E2F1Q01094 437 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 DHX9Q08211 1270 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 ITIH4Q14624 930 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 SEPT7Q16181 437 aaKnown RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 ANKRD20A4Q4UJ75 823 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 BCL7AQ4VC05 210 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 MSS51Q4VC12 460 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 LDB1Q86U70 411 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 KIF18AQ8NI77 898 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 MAPK15Q8TD08 544 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 NAT6Q93015 286 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 ZNF669Q96BR6 464 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 SGSM3Q96HU1 749 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 FCRL3Q96P31 734 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 DPH5Q9H2P9 285 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 CATSPERZQ9NTU4 200 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 MARCH4Q9P2E8 410 aaPredicted RBP19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 LRIT1Q9P2V4 623 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 ANAPC5Q9UJX4 755 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 MRFAP1Q9Y605 127 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 PRSS21Q9Y6M0 314 aa19.15■□□□□ 0.66
SEMA3B-206ENST00000439487 FAM237BA0A1B0GVD1 139 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 A6NCN8 305 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 CD3EAPO15446 510 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 CDK4P11802 303 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 GLB1P16278 677 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 VCLP18206 1134 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 IDSP22304 550 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 ARNTP27540 789 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 RPL10P27635 214 aaKnown RBP19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 PRLHRP49683 370 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 INSM1Q01101 510 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 NFE2L1Q14494 772 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 BBS9Q3SYG4 887 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 LYPLAL1Q5VWZ2 237 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 ARMC3Q5W041 872 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 IYDQ6PHW0 289 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 FAM83HQ6ZRV2 1179 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 CLDN19Q8N6F1 224 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 OR6C4Q8NGE1 309 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 SLC37A2Q8TED4 501 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 CCDC3Q9BQI4 270 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 ERP44Q9BS26 406 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 SCHIP1Q9P0W5 487 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 FAM8A1Q9UBU6 413 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 WASF3Q9UPY6 502 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 RPS6KL1Q9Y6S9 549 aa19.14■□□□□ 0.65
SEMA3B-206ENST00000439487 CACNA1BQ00975 2339 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 CEP295Q9C0D2 2601 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 MGAT4DA6NG13 374 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 PDZK1P1A8MUH7 402 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 GOLGA8KD6RF30 607 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 GOLGA8TH3BQL2 631 aa19.13■□□□□ 0.65
SEMA3B-206ENST00000439487 TP73O15350 636 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms