RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 NCKAP1Q9Y2A7 1128 aa11.46□□□□□ -0.58
TRAPPC9-202ENST00000438773 HHLA1C9JL84 531 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 RHOP08100 348 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TPP2P29144 1249 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 S100A3P33764 101 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 GRK3P35626 688 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PRIM2P49643 509 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 MRPS15P82914 257 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 MBTPS1Q14703 1052 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TNIP2Q8NFZ5 429 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 DNAJB14Q8TBM8 379 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 NPAS2Q99743 824 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 OSER1Q9NX31 292 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLDND1Q9NY35 253 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 SEC24AO95486 1093 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 DHRS4L1P0CG22 281 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 MAGEA6P43360 314 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 RPIAP49247 311 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 WDR5P61964 334 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PDK3Q15120 406 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 RALGPS1Q5JS13 557 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 LHX8Q68G74 356 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 C2CD4AQ8NCU7 369 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 FAM156AQ8NDB6 213 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TWIST2Q8WVJ9 160 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 C1QTNF7Q9BXJ2 289 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 SIRPGQ9P1W8 387 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 EIF2B4Q9UI10 523 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 RAB23Q9ULC3 237 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 DOCK5Q9H7D0 1870 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 KANSL1LA0AUZ9 987 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 NPHS1O60500 1241 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 STK16O75716 305 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 ALOX15P16050 662 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 NSG1P42857 185 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRPC1P48995 793 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 STC1P52823 247 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PCLAFQ15004 111 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 PRMT9Q6P2P2 845 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 KIAA1324Q6UXG2 1013 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 GK5Q6ZS86 529 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 SNX20Q7Z614 316 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 CPA6Q8N4T0 437 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 NSMCE2Q96MF7 247 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 RIPOR3Q96MK2 946 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 KLHL25Q9H0H3 589 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 NOL11Q9H8H0 719 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 IPPKQ9H8X2 491 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHCHD3Q9NX63 227 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 CLCA2Q9UQC9 943 aa11.45□□□□□ -0.58
TRAPPC9-202ENST00000438773 A8MT66 165 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 PTGES3LE9PB15 166 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 FAM58BPP0C7Q3 252 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CTSAP10619 480 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 INPP1P49441 399 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 PLCL1Q15111 1095 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 SLC44A2Q8IWA5 706 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 TCEAL8Q8IYN2 117 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 BHLHE22Q8NFJ8 381 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 AARSD1Q9BTE6 412 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CCDC28BQ9BUN5 200 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ATG10Q9H0Y0 220 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ASF1AQ9Y294 204 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 IQCF5A8MTL0 148 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 OR6B1O95007 311 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ITPKAP23677 461 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARSDP51689 593 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CHRNA6Q15825 494 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 TIGD2Q4W5G0 525 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ARSIQ5FYB1 569 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 TMEM198Q66K66 360 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 GDPD4Q6W3E5 623 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 SYT12Q8IV01 421 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 TAGAPQ8N103 731 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 DTNBP1Q96EV8 351 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CEP295NLQ96MC4 621 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 TRAPPC9Q96Q05 1148 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 HERC2P3Q9BVR0 1158 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 MRM3Q9HC36 420 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 MIEF1Q9NQG6 463 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 ACTL7AQ9Y615 435 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 KCNE2Q9Y6J6 123 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 CAPN14A8MX76 684 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 C9JVG2 144 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 M0R3G1 203 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 RPN2P04844 631 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 APODP05090 189 aa11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 DDX6P26196 483 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRAPPC9-202ENST00000438773 PSMD8P48556 350 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms