RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 JCHAINP01591 159 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CYP1A1P04798 512 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 PDHA1P08559 390 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 EDN3P14138 238 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 COX6B1P14854 86 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ZNF30P17039 623 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ERCC2P18074 760 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 HSPA9P38646 679 aaKnown RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 SSR1P43307 286 aaKnown RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 MTIF2P46199 727 aaKnown RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CAPZBP47756 277 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ZNF143P52747 638 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 TPM4P67936 248 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 HSD11B2P80365 405 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ATP1A4Q13733 1029 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 MYBPC3Q14896 1274 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ANO6Q4KMQ2 910 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 VWA2Q5GFL6 755 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 PLEKHS1Q5SXH7 462 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 DPY19L2P1Q6NXN4 242 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 Q6ZS92 163 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CUZD1Q86UP6 607 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ZNF677Q86XU0 584 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 RAB43Q86YS6 212 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ARHGAP12Q8IWW6 846 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 RBM12BQ8IXT5 1001 aaKnown RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 DSELQ8IZU8 1212 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 BBS5Q8N3I7 341 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 PGBD5Q8N414 524 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 GALNT16Q8N428 558 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 GRHL3Q8TE85 626 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CXorf40BQ96DE9 158 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CLIP3Q96DZ5 547 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 FER1L6-AS2Q96M78 137 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 MAP3K3Q99759 626 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CARD9Q9H257 536 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 FAM83DQ9H4H8 585 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 DHX35Q9H5Z1 703 aaKnown RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ZNF552Q9H707 407 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 SLC40A1Q9NP59 571 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 FAM207AQ9NSI2 230 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 GPATCH2LQ9NWQ4 482 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 SLC23A2Q9UGH3 650 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 PCDHGA10Q9Y5H3 936 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 ATP6V1DQ9Y5K8 247 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 KLF2Q9Y5W3 355 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 V9GYY5 206 aaPredicted RBP8.47□□□□□ -1.05
SCRN1-208ENST00000438497 TACC2O95359 2948 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 CSMD2Q7Z408 3487 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 MTORP42345 2549 aa8.47□□□□□ -1.05
SCRN1-208ENST00000438497 PKDREJQ9NTG1 2253 aa8.46□□□□□ -1.05
SCRN1-208ENST00000438497 CCDC88CQ9P219 2028 aa8.46□□□□□ -1.05
SCRN1-208ENST00000438497 UBA6A0AVT1 1052 aaPredicted RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 ANKRD62A6NC57 917 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 CAPN1P07384 714 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 STSP08842 583 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 ZNF7P17097 686 aaPredicted RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 ZNF8P17098 575 aaPredicted RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 CAPN3P20807 821 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 IDSP22304 550 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 RPL10P27635 214 aaKnown RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 HTR1EP28566 365 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 OTX2P32243 289 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 STC1P52823 247 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 EPHB1P54762 984 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 MAXP61244 160 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 PPP1CAP62136 330 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TUBB4BP68371 445 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TUBB2AQ13885 445 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 GPR18Q14330 331 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 GPR19Q15760 415 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 SEPT7Q16181 437 aaKnown RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 INSCQ1MX18 579 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TDRD12Q587J7 1177 aaKnown RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 RALGPS1Q5JS13 557 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TMTC4Q5T4D3 741 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 KLHDC7AQ5VTJ3 777 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 KLHL35Q6PF15 583 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 ABRAXAS1Q6UWZ7 409 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TRIM72Q6ZMU5 477 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 KMT5CQ86Y97 462 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 D2HGDHQ8N465 521 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TTC30BQ8N4P2 665 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 CLEC1AQ8NC01 280 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 OR8K5Q8NH50 307 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 DNAJB14Q8TBM8 379 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 SLC20A1Q8WUM9 679 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 FAR1Q8WVX9 515 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 CPT1BQ92523 772 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 RELTQ969Z4 430 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 ZNF501Q96CX3 271 aaPredicted RBP8.46□□□□□ -1.06
SCRN1-208ENST00000438497 HDAC11Q96DB2 347 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 LRFN5Q96NI6 719 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 IP6K3Q96PC2 410 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 WDR24Q96S15 920 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 TUBB2BQ9BVA1 445 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 OR2AG1Q9H205 316 aa8.46□□□□□ -1.06
SCRN1-208ENST00000438497 VPS16Q9H269 839 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms