RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 WWOXQ9NZC7 414 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 PCTPQ9UKL6 214 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 BRCA2P51587 3418 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 ZNF140P52738 457 aaPredicted RBP16.56■□□□□ 0.24
TTC3-209ENST00000438055 CDH4P55283 916 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 TGFBIQ15582 683 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 NHSL2Q5HYW2 709 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 AARS2Q5JTZ9 985 aaKnown RBP16.56■□□□□ 0.24
TTC3-209ENST00000438055 TXNDC11Q6PKC3 985 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 ADGRG5Q8IZF4 528 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 TFAP2CQ92754 450 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 AIG1Q9NVV5 245 aa16.56■□□□□ 0.24
TTC3-209ENST00000438055 DUS2Q9NX74 493 aaKnown RBP16.56■□□□□ 0.24
TTC3-209ENST00000438055 HSD17B1P14061 328 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 GDF5P43026 501 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 SLC11A1P49279 550 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 ERVK-8P63133 956 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 PPP1R8Q12972 351 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 GPR17Q13304 367 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 PLD1Q13393 1074 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 DCTN2Q13561 401 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 CLHC1Q8NHS4 586 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 ITFG1Q8TB96 612 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 TMEM125Q96AQ2 219 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 ZIC5Q96T25 663 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 TDRD1Q9BXT4 1180 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 ANKRD60Q9BZ19 345 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 POPDC3Q9HBV1 291 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 FAM8A1Q9UBU6 413 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 E2F6O75461 281 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 CLDN11O75508 207 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 GPIP06744 558 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 G6PDP11413 515 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 OR4D2P58180 307 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 CREB5Q02930 508 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 CHRNB3Q05901 458 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 OR2T11Q8NH01 316 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 MGME1Q9BQP7 344 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 GPATCH1Q9BRR8 931 aaKnown RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 STARD7Q9NQZ5 370 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 SMPD3Q9NY59 655 aaPredicted RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 TRPM5Q9NZQ8 1165 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 KLQ9UEF7 1012 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 ZNHIT2Q9UHR6 403 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 KANSL1LA0AUZ9 987 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 FOXD2O60548 495 aaPredicted RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 SNAP29O95721 258 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 CHRM1P11229 460 aaPredicted RBP16.55■□□□□ 0.24
TTC3-209ENST00000438055 LCN8Q6JVE9 175 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 ABRAXAS1Q6UWZ7 409 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 EPHX4Q8IUS5 362 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 PEX13Q92968 403 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 MYRFLQ96LU7 910 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 CIPCQ9C0C6 399 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 IPPKQ9H8X2 491 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 PREBQ9HCU5 417 aa16.55■□□□□ 0.24
TTC3-209ENST00000438055 H0YJX3 145 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 MATN4O95460 622 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 RPS17P08708 135 aaKnown RBP16.54■□□□□ 0.24
TTC3-209ENST00000438055 SGSHP51688 502 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 ACVR1Q04771 509 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 RING1Q06587 406 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 CDH18Q13634 790 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TYSND1Q2T9J0 566 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 ARTNQ5T4W7 220 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 SEPT8Q92599 483 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 BIRC7Q96CA5 298 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TTPALQ9BTX7 342 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 AGPAT4Q9NRZ5 378 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 GALNT8Q9NY28 637 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 LIMD1Q9UGP4 676 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TYW5A2RUC4 315 aaKnown RBP16.54■□□□□ 0.24
TTC3-209ENST00000438055 INHBEP58166 350 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 MBTPS1Q14703 1052 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 C16orf72Q14CZ0 275 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TAS1R1Q7RTX1 841 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 PHYKPLQ8IUZ5 450 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 KIAA2013Q8IYS2 634 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TBC1D21Q8IYX1 336 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 LINC01599Q8WXQ3 324 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 NSUN3Q9H649 340 aaKnown RBP16.54■□□□□ 0.24
TTC3-209ENST00000438055 ASB8Q9H765 288 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 WARS2Q9UGM6 360 aaKnown RBP16.54■□□□□ 0.24
TTC3-209ENST00000438055 CRLS1Q9UJA2 301 aa16.54■□□□□ 0.24
TTC3-209ENST00000438055 OAS3Q9Y6K5 1087 aaKnown RBP16.54■□□□□ 0.24
TTC3-209ENST00000438055 PABPN1LA6NDY0 278 aaKnown RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 PRMT5O14744 637 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 MBL2P11226 248 aaPredicted RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 ADARP55265 1226 aaKnown RBP16.53■□□□□ 0.24
TTC3-209ENST00000438055 ERVPABLB-1P60509 514 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 TRAF2Q12933 501 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 ARHGEF7Q14155 803 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 LETMD1Q6P1Q0 360 aa16.53■□□□□ 0.24
TTC3-209ENST00000438055 FAM81AQ8TBF8 368 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms