RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 PNPLA8Q9NP80 782 aa15.72■□□□□ 0.11
PTPN13-204ENST00000436978 COL1A1P02452 1464 aaPredicted RBP15.72■□□□□ 0.11
PTPN13-204ENST00000436978 B3GALT2O43825 422 aa15.72■□□□□ 0.11
PTPN13-204ENST00000436978 ALAS2P22557 587 aa15.72■□□□□ 0.11
PTPN13-204ENST00000436978 ZIK1Q3SY52 487 aaPredicted RBP15.72■□□□□ 0.11
PTPN13-204ENST00000436978 ING5Q8WYH8 240 aa15.72■□□□□ 0.11
PTPN13-204ENST00000436978 SPOCK2Q92563 424 aa15.72■□□□□ 0.11
PTPN13-204ENST00000436978 IFT80Q9P2H3 777 aaPredicted RBP15.72■□□□□ 0.11
PTPN13-204ENST00000436978 ESR1P03372 595 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NR1H2P55055 460 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 RAPSNQ13702 412 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 HEPACAMQ14CZ8 416 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 CNKSR3Q6P9H4 555 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 SERPINA9Q86WD7 417 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 IGLV3-22A0A075B6J6 115 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 TAF4O00268 1085 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 PLK4O00444 970 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 GOT2P00505 430 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 SAGP10523 405 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NR2F6P10588 404 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 PRKAR1AP10644 381 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NT5EP21589 574 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 DRD4P21917 467 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 SSU72Q9NP77 194 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 HCN3Q9P1Z3 774 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 AGRPO00253 132 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 FABP3P05413 133 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 LIMK2P53671 638 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 C2orf80Q0P641 193 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 FBXO42Q6P3S6 717 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 FAM129CQ86XR2 697 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 HIPK1Q86Z02 1210 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 KREMEN2Q8NCW0 462 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 LRRN4Q8WUT4 740 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 SMURF2Q9HAU4 748 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 MBD2Q9UBB5 411 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 KLHL18O94889 574 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 CMC1Q7Z7K0 106 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 ZNF567Q8N184 647 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 RASSF1Q9NS23 344 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 HMGXB4Q9UGU5 601 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 MICAL3Q7RTP6 2002 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 DLG1Q12959 904 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 ADGRD1Q6QNK2 874 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 CHST15Q7LFX5 561 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 FUKQ8N0W3 1084 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NDRG1Q92597 394 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NOL11Q9H8H0 719 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 DDX18Q9NVP1 670 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 RSL24D1Q9UHA3 163 aaKnown RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 LIN7AO14910 233 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-204ENST00000436978 PBX1P40424 430 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 ABHD13Q7L211 337 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 ALG3Q92685 438 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 NUS1Q96E22 293 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 FNIP2Q9P278 1114 aa15.71■□□□□ 0.11
PTPN13-204ENST00000436978 C2CD4BA6NLJ0 364 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 VITQ6UXI7 678 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 HEATR4Q86WZ0 1026 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 ZNF599Q96NL3 588 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 AGAP2Q99490 1192 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 DPEP3Q9H4B8 488 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 NMUR1Q9HB89 426 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 CPQQ9Y646 472 aa15.71■□□□□ 0.1
PTPN13-204ENST00000436978 RIIAD1A6NNX1 92 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 TCF4P15884 667 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 BCAP31P51572 246 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 NPAS2Q99743 824 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 EIF2B2P49770 351 aaKnown RBP15.7■□□□□ 0.1
PTPN13-204ENST00000436978 SLC7A2P52569 658 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 HADHBP55084 474 aaKnown RBP15.7■□□□□ 0.1
PTPN13-204ENST00000436978 DAOAP59103 153 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 RFKQ969G6 155 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 C7orf26Q96N11 449 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 SRMSQ9H3Y6 488 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 KHKP50053 298 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 OR2T34Q8NGX1 318 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 OR2T3Q8NH03 318 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 COL20A1Q9P218 1284 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 SSNA1O43805 119 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 CDH3P22223 829 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 MASP1P48740 699 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 CYP4F2P78329 520 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 CYP4F3Q08477 520 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 NAE1Q13564 534 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 LINGO4Q6UY18 593 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 SNX20Q7Z614 316 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 POLR3BQ9NW08 1133 aaPredicted RBP15.7■□□□□ 0.1
PTPN13-204ENST00000436978 PHF11Q9UIL8 331 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 CNTD1Q8N815 330 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 ARNTL2Q8WYA1 636 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 ROPN1LQ96C74 230 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 SHDQ96IW2 340 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 TULP3O75386 442 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 C2P06681 752 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 MPP1Q00013 466 aa15.7■□□□□ 0.1
PTPN13-204ENST00000436978 HNRNPDQ14103 355 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms