RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 VPS51Q9UID3 782 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 PADI4Q9UM07 663 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 PCDHB9Q9Y5E1 797 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 AK5Q9Y6K8 562 aa18.38■□□□□ 0.53
CLK1-205ENST00000434813 DHRS12A0PJE2 317 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 PRMT5O14744 637 aaPredicted RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 TIPRLO75663 272 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 AP1S1P61966 158 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 CERS6Q6ZMG9 384 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 CARM1Q86X55 608 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 TMEM125Q96AQ2 219 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 PPWD1Q96BP3 646 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 MYO19Q96H55 970 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 TEX37Q96LM6 180 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 CIB1Q99828 191 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 ZIM2Q9NZV7 527 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 DNMT3BQ9UBC3 853 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 FCF1Q9Y324 198 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 DHRS7Q9Y394 339 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 ST14Q9Y5Y6 855 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SLC30A1Q9Y6M5 507 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 MICAL3Q7RTP6 2002 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 A0A0U1RQS6 177 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 TYW5A2RUC4 315 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 EME2A4GXA9 379 aaPredicted RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 GOLGA8CPA6NN73 597 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 GFRA2O00451 464 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 GPR39O43194 453 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 AKAP10O43572 662 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SLC22A3O75751 556 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 OR4F21O95013 312 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 MBL2P11226 248 aaPredicted RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 GJA8P48165 433 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SMAD3P84022 425 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 NFYCQ13952 458 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 PCBP2Q15366 365 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLK1-205ENST00000434813 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 LYSMD3Q7Z3D4 306 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 ADAMTSL2Q86TH1 951 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 DCAF4L2Q8NA75 395 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 GRIN3AQ8TCU5 1115 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 EID2BQ96D98 161 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SLC45A3Q96JT2 553 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 ACOX2Q99424 681 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SLC29A1Q99808 456 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 GPR63Q9BZJ6 419 aa18.37■□□□□ 0.53
CLK1-205ENST00000434813 SARS2Q9NP81 518 aaKnown RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 LEF1Q9UJU2 399 aaPredicted RBP18.37■□□□□ 0.53
CLK1-205ENST00000434813 MKI67P46013 3256 aaKnown RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 COL4A6Q14031 1691 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 ARPC2O15144 300 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 HNRNPRO43390 633 aaKnown RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 PGLSO95336 258 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 SOD2P04179 222 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 TBCELQ5QJ74 424 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 ATXN7L2Q5T6C5 722 aaPredicted RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 ARMC12Q5T9G4 340 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 PPP4R4Q6NUP7 873 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 PACRGLQ8N7B6 248 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 OR52B6Q8NGF0 335 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 ESAMQ96AP7 390 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 VPS33AQ96AX1 596 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 PRPF18Q99633 342 aaKnown RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 C11orf49Q9H6J7 331 aa18.36■□□□□ 0.53
CLK1-205ENST00000434813 TNPO3Q9Y5L0 923 aaKnown RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 ZNF106Q9H2Y7 1883 aaKnown RBP18.36■□□□□ 0.53
CLK1-205ENST00000434813 IQCF5A8MTL0 148 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 GREM1O60565 184 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 PRAMEF12O95522 483 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 RPS3P23396 243 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLK1-205ENST00000434813 PSMA4P25789 261 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 CSKP41240 450 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 SH3BGRP55822 239 aaPredicted RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 ERVPABLB-1P60509 514 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 UFM1P61960 85 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 YBX1P67809 324 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 C6orf136Q5SQH8 315 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 COL13A1Q5TAT6 717 aaPredicted RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 SBSNQ6UWP8 590 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 FRA10AC1Q70Z53 315 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 TMEM150AQ86TG1 271 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 PTRH1Q86Y79 214 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 SPPL2CQ8IUH8 684 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 TMEM199Q8N511 208 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 METTL25Q8N6Q8 603 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 CDYL2Q8N8U2 506 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 ALG14Q96F25 216 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 PAWRQ96IZ0 340 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 C19orf43Q9BQ61 176 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 EGFL7Q9UHF1 273 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 RNF11Q9Y3C5 154 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 ABHD14A-ACY1A0A1B0GW23 586 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 CCDC154A6NI56 674 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 GPIP06744 558 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 POLR2JP52435 117 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 CDH18Q13634 790 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 ATP6AP1LQ52LC2 224 aa18.35■□□□□ 0.53
CLK1-205ENST00000434813 INTS11Q5TA45 600 aaKnown RBP18.35■□□□□ 0.53
CLK1-205ENST00000434813 LETMD1Q6P1Q0 360 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms