RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ACADVLP49748 655 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 CTSCP53634 463 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 ARL4CP56559 192 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 DBN1Q16643 649 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 HIF1AQ16665 826 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 C14orf28Q4W4Y0 310 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 GUSBP11Q6P575 273 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 AMZ2Q86W34 360 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 PIANPQ8IYJ0 282 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 BEND7Q8N7W2 519 aaPredicted RBP15.29■□□□□ 0.04
TREX1-201ENST00000433541 NAT6Q93015 286 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 TIMM29Q9BSF4 260 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 RPS6KL1Q9Y6S9 549 aa15.29■□□□□ 0.04
TREX1-201ENST00000433541 DCHS1Q96JQ0 3298 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 TRBV5-4A0A0C4DH59 114 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 RHPN2P1A8MT19 583 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 F8W8V4 182 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 NDUFS3O75489 264 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 BANF1O75531 89 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 POP7O75817 140 aaKnown RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 POLBP06746 335 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 IDSP22304 550 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 ACP1P24666 158 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 HALP42357 657 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 MAZP56270 477 aaKnown RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 ACVR1Q04771 509 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 DHX9Q08211 1270 aaKnown RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 THOC5Q13769 683 aaKnown RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 HP1BP3Q5SSJ5 553 aaPredicted RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 MRNIPQ6NTE8 343 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 HIBCHQ6NVY1 386 aaPredicted RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 DHRS13Q6UX07 377 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 CERS6Q6ZMG9 384 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 ERMP1Q7Z2K6 904 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 ZNF572Q7Z3I7 529 aaPredicted RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 SDCCAG8Q86SQ7 713 aaPredicted RBP15.28■□□□□ 0.04
TREX1-201ENST00000433541 SLCO6A1Q86UG4 719 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 TRIM48Q8IWZ4 208 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 MAPK15Q8TD08 544 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 PATE1Q8WXA2 126 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 CFAP36Q96G28 342 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 TREX1Q9NSU2 369 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
TREX1-201ENST00000433541 ASXL3Q9C0F0 2248 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 FAM237BA0A1B0GVD1 139 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 UBA6A0AVT1 1052 aaPredicted RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 AGAP14A8MT82 685 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 GOLGA8KD6RF30 607 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 GOLGA8TH3BQL2 631 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 TRIM16O95361 564 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 PGAM1P18669 254 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 IVDP26440 423 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 RPL10P27635 214 aaKnown RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 NSG1P42857 185 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 TTPAP49638 278 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 DRG2P55039 364 aaKnown RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 B4GALNT1Q00973 533 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 SLC7A5Q01650 507 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 ITIH4Q14624 930 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 ANKRD20A4Q4UJ75 823 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 ARMC3Q5W041 872 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 KIAA0930Q6ICG6 404 aaPredicted RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 ZNF449Q6P9G9 518 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 LDB1Q86U70 411 aaPredicted RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 ZNF547Q8IVP9 402 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 SFTPA2Q8IWL1 248 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 CLDN19Q8N6F1 224 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 CEP112Q8N8E3 955 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
TREX1-201ENST00000433541 OR6C4Q8NGE1 309 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 CCDC74AQ96AQ1 378 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 TRIM56Q9BRZ2 755 aaKnown RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 PRDM8Q9NQV8 689 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 C20orf96Q9NUD7 363 aaPredicted RBP15.27■□□□□ 0.04
TREX1-201ENST00000433541 IL1RAPL1Q9NZN1 696 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 LRIT1Q9P2V4 623 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 TBC1D29Q9UFV1 150 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 CHMP2BQ9UQN3 213 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 PCDHGA1Q9Y5H4 931 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 ST14Q9Y5Y6 855 aa15.27■□□□□ 0.04
TREX1-201ENST00000433541 PTPRBP23467 1997 aa15.27■□□□□ 0.03
TREX1-201ENST00000433541 EME2A4GXA9 379 aaPredicted RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 QSOX1O00391 747 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 ZW10O43264 779 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 NOBOXO60393 691 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 FTH1P02794 183 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 OR56A5P0C7T3 313 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 CDK4P11802 303 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 F3P13726 295 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PSMA3P25788 255 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 MAGEA3P43357 314 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PRLHRP49683 370 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PDIA2Q13087 525 aaKnown RBP15.26■□□□□ 0.03
TREX1-201ENST00000433541 ILKQ13418 452 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 NFE2L1Q14494 772 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 LONRF1Q17RB8 773 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 BCL7AQ4VC05 210 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 SYTL3Q4VX76 610 aa15.26■□□□□ 0.03
TREX1-201ENST00000433541 PTRHD1Q6GMV3 140 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms