RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 H2AFVQ71UI9 128 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 VSIG1Q86XK7 387 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 CPNE8Q86YQ8 564 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 ZNF547Q8IVP9 402 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 PLD5Q8N7P1 536 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.62□□□□□ -0.07
PRKDC-203ENST00000432581 CTNNBL1Q8WYA6 563 aaPredicted RBP14.62□□□□□ -0.07
PRKDC-203ENST00000432581 RAPGEF5Q92565 580 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 FCRL4Q96PJ5 515 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 PSMG3-AS1Q96PY0 264 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 BRD8Q9H0E9 1235 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 SLC25A51Q9H1U9 297 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 CBX8Q9HC52 389 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 LHX9Q9NQ69 397 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 SEMA5BQ9P283 1151 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 LUC7L2Q9Y383 392 aaKnown RBP14.62□□□□□ -0.07
PRKDC-203ENST00000432581 HEY1Q9Y5J3 304 aa14.62□□□□□ -0.07
PRKDC-203ENST00000432581 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-203ENST00000432581 HALP42357 657 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 DRG2P55039 364 aaKnown RBP14.61□□□□□ -0.07
PRKDC-203ENST00000432581 TPM4P67936 248 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 PDK1Q15118 436 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 PCSK7Q16549 785 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 SLC9A4Q6AI14 798 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 KLHL35Q6PF15 583 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 BPHLQ86WA6 291 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-203ENST00000432581 TRAPPC5Q8IUR0 188 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 APLFQ8IW19 511 aaPredicted RBP14.61□□□□□ -0.07
PRKDC-203ENST00000432581 BRSK1Q8TDC3 778 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 CPLX3Q8WVH0 158 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 UBXN4Q92575 508 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 TADA1Q96BN2 335 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 RNF31Q96EP0 1072 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 SLC41A2Q96JW4 573 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 AGAP3Q96P47 875 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 TLK1Q9UKI8 766 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 RARRES3Q9UL19 164 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 NENFQ9UMX5 172 aa14.61□□□□□ -0.07
PRKDC-203ENST00000432581 NOTCH2Q04721 2471 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 SPENQ96T58 3664 aaKnown RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 LRRD1A4D1F6 860 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 K7EM74 188 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 APOL1O14791 398 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 NDST3O95803 873 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 ZFXP17010 805 aaPredicted RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 MLLT10P55197 1068 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 UBASH3AP57075 661 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 FANCCQ00597 558 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 ACY1Q03154 408 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 TUBB3Q13509 450 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 SEMA5AQ13591 1074 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 KHDC1Q4VXA5 237 aaKnown RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 ZDHHC20Q5W0Z9 365 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 C11orf96Q7Z7L8 435 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 TMEM135Q86UB9 458 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 SIDT2Q8NBJ9 832 aaKnown RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 CT55Q8WUE5 264 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 THAP4Q8WY91 577 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 TTC25Q96NG3 672 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 MAK16Q9BXY0 300 aaKnown RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 GPR87Q9BY21 358 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 CEP41Q9BYV8 373 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 ZCCHC2Q9C0B9 1178 aaKnown RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 ACTL8Q9H568 366 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 TRIM10Q9UDY6 481 aa14.6□□□□□ -0.07
PRKDC-203ENST00000432581 RP1L1Q8IWN7 2480 aaPredicted RBP14.6□□□□□ -0.07
PRKDC-203ENST00000432581 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
PRKDC-203ENST00000432581 FECHP22830 423 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 HMGCLP35914 325 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 DMPKQ09013 629 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 TMEM115Q12893 351 aaPredicted RBP14.59□□□□□ -0.07
PRKDC-203ENST00000432581 ATP13A5Q4VNC0 1218 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 PWWP2BQ6NUJ5 590 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 AMZ2Q86W34 360 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 KMT5CQ86Y97 462 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 GDAP1Q8TB36 358 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 DTX3LQ8TDB6 740 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 OLFM3Q96PB7 478 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 CD180Q99467 661 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 TRABDQ9H4I3 376 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 GLOD4Q9HC38 313 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.59□□□□□ -0.07
PRKDC-203ENST00000432581 TMPRSS11EQ9UL52 423 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 WDR37Q9Y2I8 494 aa14.59□□□□□ -0.07
PRKDC-203ENST00000432581 A0A0A6YYK5 440 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-203ENST00000432581 IGHV5-51A0A0C4DH38 117 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 BLACEA4D250 179 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 VPS4BO75351 444 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 TIAF1O95411 115 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 MT-CYBP00156 380 aaPredicted RBP14.58□□□□□ -0.08
PRKDC-203ENST00000432581 GYPCP04921 128 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 FOLR1P15328 257 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 PTPN4P29074 926 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 ARL4DP49703 201 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 PDE1BQ01064 536 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 SLC18A3Q16572 532 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 UGT8Q16880 541 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 TEX44Q53QW1 395 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 EFCAB3Q8N7B9 438 aa14.58□□□□□ -0.08
PRKDC-203ENST00000432581 SPATA22Q8NHS9 363 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms