RNA–Protein interactions for RNA: ENST00000430013.1

CBS-205, Transcript of cystathionine-beta-synthase, human

TSL 5

Gene CBS, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBS-205	ENST00000430013	PSMB4	P28070	264 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	PTPN7	P35236	360 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	CTSC	P53634	463 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	TMEM115	Q12893	351 aa	Predicted RBP	18.54	■□□□□ 0.56
CBS-205	ENST00000430013	MPP3	Q13368	585 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	KIR2DS5	Q14953	304 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	CLCA4	Q14CN2	919 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	PDPK2P	Q6A1A2	396 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	FAM151B	Q6UXP7	276 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	GLT6D1	Q7Z4J2	308 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	LRRTM4	Q86VH4	590 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	MED8	Q96G25	268 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	DPYSL5	Q9BPU6	564 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013	PCDHB11	Q9Y5F2	797 aa		18.54	■□□□□ 0.56
CBS-205	ENST00000430013		B4E171	279 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	STMND1	H3BQB6	276 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	KCNN4	O15554	427 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	FTCD	O95954	541 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	HLA-DPA1	P20036	260 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	CD82	P27701	267 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	TSPAN7	P41732	249 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	MC2R	Q01718	297 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	ANKRD20A2	Q5SQ80	823 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	ANKRD20A1	Q5TYW2	823 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	ANKRD20A3	Q5VUR7	823 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	DARS2	Q6PI48	645 aa	Known RBP	18.53	■□□□□ 0.56
CBS-205	ENST00000430013	TMEM26	Q6ZUK4	368 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	TIPARP	Q7Z3E1	657 aa	Known RBP	18.53	■□□□□ 0.56
CBS-205	ENST00000430013	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.53	■□□□□ 0.56
CBS-205	ENST00000430013	RASGEF1A	Q8N9B8	481 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	CCDC110	Q8TBZ0	833 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	SH3KBP1	Q96B97	665 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	RTP4	Q96DX8	246 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	CALR3	Q96L12	384 aa	Known RBP	18.53	■□□□□ 0.56
CBS-205	ENST00000430013	VPS35	Q96QK1	796 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	SRPK1	Q96SB4	655 aa	Known RBP	18.53	■□□□□ 0.56
CBS-205	ENST00000430013	DDA1	Q9BW61	102 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	FSD1L	Q9BXM9	530 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	EFR3B	Q9Y2G0	817 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	KCTD3	Q9Y597	815 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	ARL5A	Q9Y689	179 aa		18.53	■□□□□ 0.56
CBS-205	ENST00000430013	BOD1L1	Q8NFC6	3051 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	OR5K4	A6NMS3	321 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	PDZK1P1	A8MUH7	402 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	GPR89A	B7ZAQ6	455 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	DDX3Y	O15523	660 aa	Known RBP	18.52	■□□□□ 0.56
CBS-205	ENST00000430013	VEGFD	O43915	354 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	FAM87A	P0C7U9	286 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	GPR89B	P0CG08	455 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	LIF	P15018	202 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	SPAM1	P38567	509 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	TNNT3	P45378	269 aa	Predicted RBP	18.52	■□□□□ 0.56
CBS-205	ENST00000430013	LEPR	P48357	1165 aa	Known RBP	18.52	■□□□□ 0.56
CBS-205	ENST00000430013	EPHA4	P54764	986 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	GEM	P55040	296 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	TBR1	Q16650	682 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	ABRAXAS1	Q6UWZ7	409 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	18.52	■□□□□ 0.56
CBS-205	ENST00000430013	PEX26	Q7Z412	305 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	GDAP1	Q8TB36	358 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	TIMM29	Q9BSF4	260 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	SLC12A9	Q9BXP2	914 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	TRABD	Q9H4I3	376 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	PILRA	Q9UKJ1	303 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	AMFR	Q9UKV5	643 aa		18.52	■□□□□ 0.56
CBS-205	ENST00000430013	LILRA5	A6NI73	299 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	RAD1	O60671	282 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	VIP	P01282	170 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	SLC2A4	P14672	509 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	CDC25B	P30305	580 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	ADRA1A	P35348	466 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	SPARCL1	Q14515	664 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	DCAF12	Q5T6F0	453 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	ITPRIPL1	Q6GPH6	555 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	TRAPPC5	Q8IUR0	188 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	UNC5B	Q8IZJ1	945 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	CACNA2D3	Q8IZS8	1091 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	RSC1A1	Q92681	617 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	STN1	Q9H668	368 aa	Known RBP	18.51	■□□□□ 0.55
CBS-205	ENST00000430013	HACD3	Q9P035	362 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	CAPN6	Q9Y6Q1	641 aa		18.51	■□□□□ 0.55
CBS-205	ENST00000430013	MN1	Q10571	1320 aa	Predicted RBP	18.5	■□□□□ 0.55
CBS-205	ENST00000430013	BSN	Q9UPA5	3926 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	GLYATL1P3	A0A0U1RQE8	302 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	TCRBV7S2A1N4T	A0A589	114 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013		B8ZZF3	427 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	KIF1C	O43896	1103 aa	Known RBP	18.5	■□□□□ 0.55
CBS-205	ENST00000430013	POP7	O75817	140 aa	Known RBP	18.5	■□□□□ 0.55
CBS-205	ENST00000430013	ANXA9	O76027	345 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	UBXN7	O94888	489 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	TJP3	O95049	919 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	C9	P02748	559 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	ITGB6	P18564	788 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	PPP1CA	P62136	330 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	SH3BP2	P78314	561 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	NFKB2	Q00653	900 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	MSLN	Q13421	630 aa	Predicted RBP	18.5	■□□□□ 0.55
CBS-205	ENST00000430013	GPRC6A	Q5T6X5	926 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	TMEM220	Q6QAJ8	160 aa		18.5	■□□□□ 0.55
CBS-205	ENST00000430013	XKR5	Q6UX68	686 aa		18.5	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms