RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 STC1P52823 247 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PGGT1BP53609 377 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ATXN3P54252 364 aaPredicted RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 DEFB103AP81534 67 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PLOD1Q02809 727 aaPredicted RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CLCQ05315 142 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SLC10A7Q0GE19 358 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF235Q14590 738 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SLC36A3Q495N2 470 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CLEC6AQ6EIG7 209 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF280DQ6N043 979 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 LAYNQ6UX15 382 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CYP2R1Q6VVX0 501 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CYHR1Q6ZMK1 362 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 FAM43BQ6ZT52 329 aaPredicted RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 KDELC2Q7Z4H8 507 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 RETREG3Q86VR2 466 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SCN4BQ8IWT1 228 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 DDIASQ8IXT1 998 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 MYO1HQ8N1T3 1032 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 FIBCD1Q8N539 461 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 OR56A4Q8NGH8 313 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PTERQ96BW5 349 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TUBGCP3Q96CW5 907 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ASIC4Q96FT7 647 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TBATAQ96M53 351 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CDK5RAP1Q96SZ6 601 aaKnown RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 CIB1Q99828 191 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ADI1Q9BV57 179 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 UNKQ9C0B0 810 aaKnown RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PLGRKTQ9HBL7 147 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TNFRSF12AQ9NP84 129 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 NLE1Q9NVX2 485 aaPredicted RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PKD2L2Q9NZM6 624 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 TMEM9Q9P0T7 183 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 SUN2Q9UH99 717 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ANAPC2Q9UJX6 822 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 RNF112Q9ULX5 631 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 AURKCQ9UQB9 309 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PCDHB5Q9Y5E4 795 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 PCDHA9Q9Y5H5 950 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 GPR45Q9Y5Y3 372 aa8.62□□□□□ -1.03
GABPB1-205ENST00000429662 ANKRD11Q6UB99 2663 aaPredicted RBP8.62□□□□□ -1.03
GABPB1-205ENST00000429662 FAM234BA2RU67 622 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CCDC162PA2VCL2 907 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CCDC154A6NI56 674 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 OR6C75A6NL08 312 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 C2orf81A6NN90 581 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SUPT3HB4E1H0 165 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 J3KR12 359 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 UBXN8O00124 270 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SYN3O14994 580 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SNX2O60749 519 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TULP3O75386 442 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 VPS26AO75436 327 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SUPT3HO75486 399 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 NDUFS3O75489 264 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SLC22A3O75751 556 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RHOBTB1O94844 696 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ESRRBO95718 433 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 EOMESO95936 686 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ADH1BP00325 375 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 POMCP01189 267 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CYBBP04839 570 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RPS17P08708 135 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CDK4P11802 303 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 MTHFD2P13995 350 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 KCNC1P48547 511 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CCT8P50990 548 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ARSDP51689 593 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CLCN4P51793 760 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ERVK-8P63133 956 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 DLX2Q07687 328 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 EPS8Q12929 822 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 NFYCQ13952 458 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 RCAN2Q14206 197 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 GK3PQ14409 553 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 LPIN1Q14693 890 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 TAF1AQ15573 450 aaPredicted RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FXNQ16595 210 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PFKFB4Q16877 469 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 SMU1Q2TAY7 513 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 C5orf22Q49AR2 442 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 VPS26BQ4G0F5 336 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FAM26DQ5JW98 314 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PLA2G2CQ5R387 149 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 UGT3A1Q6NUS8 523 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FBXL22Q6P050 247 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ZNF549Q6P9A3 640 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 PATL1Q86TB9 770 aaKnown RBP8.61□□□□□ -1.03
GABPB1-205ENST00000429662 ADGRG5Q8IZF4 528 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 LRRC43Q8N309 656 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 DHRSXQ8N5I4 330 aa8.61□□□□□ -1.03
GABPB1-205ENST00000429662 FAM47BQ8NA70 645 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms