RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 APCDD1Q8J025 514 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 GOLM1Q8NBJ4 401 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 EME1Q96AY2 570 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 ZIM2Q9NZV7 527 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
THBS3-202ENST00000428962 EVLQ9UI08 416 aaPredicted RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
THBS3-202ENST00000428962 C15orf38-AP3S2A0A0A6YYH1 394 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 TRAV19A0A0A6YYK7 116 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 A0A1B0GTL3 188 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 A0A1W2PP18 115 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 AQP12BA6NM10 295 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 K7ERQ8 282 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 TEX28O15482 410 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 EFCAB14O75071 495 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 PFKLP17858 780 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 DGKAP23743 735 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 ACRV1P26436 265 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 SPAM1P38567 509 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 PTPN5P54829 565 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 NFATC2Q13469 925 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 RCAN2Q14206 197 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 INPP5AQ14642 412 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 PTPRRQ15256 657 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 CRY1Q16526 586 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 GPR33Q49SQ1 333 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 ATP6AP1LQ52LC2 224 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 FBXO48Q5FWF7 155 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 RNF220Q5VTB9 566 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 FAM219BQ5XKK7 198 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 ARPINQ7Z6K5 226 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 AQP12AQ8IXF9 295 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 PDPRQ8NCN5 879 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 AUTS2Q8WXX7 1259 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 BHMTQ93088 406 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 EID2BQ96D98 161 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.25
THBS3-202ENST00000428962 SLC39A3Q9BRY0 314 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 ASB8Q9H765 288 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 ABCB8Q9NUT2 735 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 CFAP97Q9P2B7 532 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 MAP10Q9P2G4 905 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 CRLS1Q9UJA2 301 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 LEF1Q9UJU2 399 aaPredicted RBP13.52□□□□□ -0.25
THBS3-202ENST00000428962 AP4B1Q9Y6B7 739 aa13.52□□□□□ -0.25
THBS3-202ENST00000428962 TRBV5-4A0A0C4DH59 114 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 GLYATL1P3A0A0U1RQE8 302 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 GRXCR2A6NFK2 248 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 IQCF5A8MTL0 148 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 NME4O00746 187 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 DNAJA2O60884 412 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 EEDO75530 441 aaKnown RBP13.51□□□□□ -0.25
THBS3-202ENST00000428962 SLC22A3O75751 556 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 OR4F21O95013 312 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 OTCP00480 354 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 LRG1P02750 347 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 ARL1P40616 181 aaPredicted RBP13.51□□□□□ -0.25
THBS3-202ENST00000428962 CYP4F8P98187 520 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 ECT2LQ008S8 904 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 LMAN2Q12907 356 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 NFYCQ13952 458 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 TLR1Q15399 786 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 UGT2A3Q6UWM9 527 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 CCDC149Q6ZUS6 474 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 ELMOD1Q8N336 334 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 CBARPQ8N350 705 aaPredicted RBP13.51□□□□□ -0.25
THBS3-202ENST00000428962 CDYL2Q8N8U2 506 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 TTC16Q8NEE8 873 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 OR6K2Q8NGY2 324 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 FIBINQ8TAL6 211 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 LRRC58Q96CX6 371 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 PLEKHG4BQ96PX9 1271 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 TSC22D3Q99576 134 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 HTATIP2Q9BUP3 242 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 FAM126AQ9BYI3 521 aaPredicted RBP13.51□□□□□ -0.25
THBS3-202ENST00000428962 CIPCQ9C0C6 399 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 IL1RL2Q9HB29 575 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 ARMC1Q9NVT9 282 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 ZNF225Q9UK10 706 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 OARD1Q9Y530 152 aa13.51□□□□□ -0.25
THBS3-202ENST00000428962 A0A0U1RQS6 177 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 FAM234BA2RU67 622 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 CCDC154A6NI56 674 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 FFAR2O15552 330 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 PRAMEF12O95522 483 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GLUD1P00367 558 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 PRDX3P30048 256 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 DIO3P55073 304 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 SNRPD1P62314 119 aaKnown RBP13.5□□□□□ -0.25
THBS3-202ENST00000428962 ZXDBP98169 803 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GTF2H2Q13888 395 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 PLEKHG6Q3KR16 790 aa13.5□□□□□ -0.25
THBS3-202ENST00000428962 GTF2H2CQ6P1K8 395 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms