RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 C16orf46Q6P387 395 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 XKR5Q6UX68 686 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 FRMD7Q6ZUT3 714 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 ANKRD13BQ86YJ7 626 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 SFTPA1Q8IWL2 248 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 PDCD6IPQ8WUM4 868 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 RASSF5Q8WWW0 418 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 HPS1Q92902 700 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 QKIQ96PU8 341 aaKnown RBP eCLIP11.32□□□□□ -0.6
CECR3-201ENST00000428828 KLF6Q99612 283 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 CIPCQ9C0C6 399 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 KLHL25Q9H0H3 589 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 COPS7BQ9H9Q2 264 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 GPN2Q9H9Y4 310 aaPredicted RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 INTS6Q9UL03 887 aaKnown RBP11.32□□□□□ -0.6
CECR3-201ENST00000428828 CDC14AQ9UNH5 594 aa11.32□□□□□ -0.6
CECR3-201ENST00000428828 A0A1W2PPW3 197 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 FAM172BPA6NC97 362 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 SGK1O00141 431 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 KCNK1O00180 336 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 KCNN4O15554 427 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 C7P10643 843 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 UBL4AP11441 157 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 SRFP11831 508 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 BMP1P13497 986 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CTSOP43234 321 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 GDF10P55107 478 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 IFITM2Q01629 132 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ITGADQ13349 1161 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 TUBA3CQ13748 450 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 HEATR6Q6AI08 1181 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 TXNDC11Q6PKC3 985 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CDHR3Q6ZTQ4 885 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 PDIK1LQ8N165 341 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.31□□□□□ -0.6
CECR3-201ENST00000428828 MFSD2AQ8NA29 543 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 FBXO36Q8NEA4 188 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 SLC35B2Q8TB61 432 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 SORCS1Q8WY21 1168 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 HDAC11Q96DB2 347 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 MRRFQ96E11 262 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 TXNDC15Q96J42 360 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CNDP1Q96KN2 507 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 RPL10LQ96L21 214 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 TMEM79Q9BSE2 394 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 HOXD1Q9GZZ0 328 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 MRPL40Q9NQ50 206 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 C8orf4Q9NR00 106 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 VPS51Q9UID3 782 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 RABL2BQ9UNT1 228 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CORINQ9Y5Q5 1042 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 RAD54BQ9Y620 910 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 ACOX3O15254 700 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 NCAM2O15394 837 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 NUAK1O60285 661 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 MAFKO60675 156 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 IFNB1P01574 187 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 CISD3P0C7P0 127 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CCNA2P20248 432 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 GRK2P25098 689 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CTHP32929 405 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 PSMD8P48556 350 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 STK19P49842 368 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 MRPS22P82650 360 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 ARF5P84085 180 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CD300CQ08708 224 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CDC20Q12834 499 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 PON2Q15165 354 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 NHSL2Q5HYW2 709 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 FGD3Q5JSP0 725 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 TMEM215Q68D42 235 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ZNF783Q6ZMS7 281 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 ESX1Q8N693 406 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 FAM71DQ8N9W8 422 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 DCAF4L2Q8NA75 395 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ATL1Q8WXF7 558 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 S100ZQ8WXG8 99 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 ALG14Q96F25 216 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 LMLNQ96KR4 655 aa11.31□□□□□ -0.6
CECR3-201ENST00000428828 NECAB3Q96P71 396 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 WDR83Q9BRX9 315 aaKnown RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 C2orf49Q9BVC5 232 aaPredicted RBP11.31□□□□□ -0.6
CECR3-201ENST00000428828 SLC13A1Q9BZW2 595 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms