RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 METTL6Q8TCB7 284 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 ADAMTS19Q8TE59 1207 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 CANT1Q8WVQ1 401 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 EME1Q96AY2 570 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 VWCEQ96DN2 955 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 UBXN10Q96LJ8 280 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 BIRC8Q96P09 236 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 SLC29A1Q99808 456 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 RTKNQ9BST9 563 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 MFSD1Q9H3U5 465 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 PDFQ9HBH1 243 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 POLG2Q9UHN1 485 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 CRLS1Q9UJA2 301 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 DGKBQ9Y6T7 804 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 FRMPD3Q5JV73 1810 aa8.28□□□□□ -1.08
CD44-208ENST00000428726 IGLV3-10A0A075B6K4 115 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 C15orf38-AP3S2A0A0A6YYH1 394 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 FAM92AA1XBS5 289 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 NPIPB15A6NHN6 443 aaPredicted RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 AZIN1O14977 448 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 SLC22A2O15244 555 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 SLC7A4O43246 635 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 NPHS1O60500 1241 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 PAPSS2O95340 614 aaPredicted RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 C8AP07357 584 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 ADSLP30566 484 aaPredicted RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 AKT1P31749 480 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 YAP1P46937 504 aaKnown RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 TUFMP49411 452 aaKnown RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 IL1RL1Q01638 556 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 SLC5A9Q2M3M2 681 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 GTDC1Q4AE62 458 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 ANKRD26P1Q6NSI1 321 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 LETMD1Q6P1Q0 360 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 ARPINQ7Z6K5 226 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 ST13P4Q8IZP2 240 aaPredicted RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 OFCC1Q8IZS5 231 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 BBS5Q8N3I7 341 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 FIBCD1Q8N539 461 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 PNPT1Q8TCS8 783 aaKnown RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 JADE3Q92613 823 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 FEM1CQ96JP0 617 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 CNDP1Q96KN2 507 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 PSKH2Q96QS6 385 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 CCDC28BQ9BUN5 200 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 WRAP53Q9BUR4 548 aaKnown RBP8.27□□□□□ -1.08
CD44-208ENST00000428726 SLC46A2Q9BY10 475 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 KLQ9UEF7 1012 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 UTS2RQ9UKP6 389 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 PKP3Q9Y446 797 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 DTNAQ9Y4J8 743 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 INSL5Q9Y5Q6 135 aa8.27□□□□□ -1.08
CD44-208ENST00000428726 A0A1B0GVM2 712 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 DRGXA6NNA5 263 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 GIPC1O14908 333 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 SYNCRIPO60506 623 aaKnown RBP8.27□□□□□ -1.09
CD44-208ENST00000428726 COL6A1P12109 1028 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 PKMP14618 531 aaKnown RBP8.27□□□□□ -1.09
CD44-208ENST00000428726 ME2P23368 584 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 OXTRP30559 389 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 MTTPP55157 894 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 CDH4P55283 916 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 DNAJB13P59910 316 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 STX1BP61266 288 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TNK2Q07912 1038 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 NR6A1Q15406 480 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 ZNF423Q2M1K9 1284 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TMC5Q6UXY8 1006 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 GALNT7Q86SF2 657 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 ADGRG6Q86SQ4 1221 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 SETD3Q86TU7 594 aaPredicted RBP8.27□□□□□ -1.09
CD44-208ENST00000428726 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 PHACTR4Q8IZ21 702 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TEX26Q8N6G2 289 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TMIGD2Q96BF3 282 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
CD44-208ENST00000428726 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 ZNF558Q96NG5 402 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 MYOCQ99972 504 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 EXD2Q9NVH0 621 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 CACNA2D2Q9NY47 1150 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 AASSQ9UDR5 926 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 ANGPTL3Q9Y5C1 460 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 PCDHGA7Q9Y5G6 932 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 U3KQV3 271 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 DOCK4Q8N1I0 1966 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 TMEM202A6NGA9 273 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 H7C4K7 107 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 RSL1D1O76021 490 aaKnown RBP8.27□□□□□ -1.09
CD44-208ENST00000428726 ARHGEF15O94989 841 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 CRTAMO95727 393 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 FGF1P05230 155 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 RBP1P09455 135 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 SLC2A4P14672 509 aa8.27□□□□□ -1.09
CD44-208ENST00000428726 IMPDH1P20839 514 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms