RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MRPS18BQ9Y676 258 aaKnown RBP15.26■□□□□ 0.03
SEC13-210ENST00000428626 PTPN13Q12923 2485 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 FLNCQ14315 2725 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 POLR1CO15160 346 aaPredicted RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 CAPN5O15484 640 aaPredicted RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 PRKAR1AP10644 381 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 MAP4P27816 1152 aaKnown RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 OAS2P29728 719 aaKnown RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 SEPHS1P49903 392 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 POLE2P56282 527 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 GPR18Q14330 331 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 CHRNA6Q15825 494 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 FAM83HQ6ZRV2 1179 aaPredicted RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 PLXDC1Q8IUK5 500 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 RASGEF1AQ8N9B8 481 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 TC2NQ8N9U0 490 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 NAT14Q8WUY8 206 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 KRT35Q92764 455 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 FCRL5Q96RD9 977 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 TSPY26PQ9H489 355 aa15.25■□□□□ 0.03
SEC13-210ENST00000428626 GPN2Q9H9Y4 310 aaPredicted RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 HEMK1Q9Y5R4 338 aaPredicted RBP15.25■□□□□ 0.03
SEC13-210ENST00000428626 SPENQ96T58 3664 aaKnown RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 ZNF891A8MT65 544 aaPredicted RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 PSTPIP1O43586 416 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 PPFIA2O75334 1257 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 STAT5AP42229 794 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 HADHBP55084 474 aaKnown RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 KCNC4Q03721 635 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 ABHD18Q0P651 414 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 OLIG2Q13516 323 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 TFDP2Q14188 446 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 SLC1A5Q15758 541 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 AGAP9Q5VTM2 703 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 CCDC70Q6NSX1 233 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 FAM151BQ6UXP7 276 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 WASH2PQ6VEQ5 465 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 PTRH1Q86Y79 214 aaKnown RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 TRAPPC5Q8IUR0 188 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 TRIM48Q8IWZ4 208 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 AVL9Q8NBF6 648 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 IPMKQ8NFU5 416 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 GPR150Q8NGU9 434 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 QKIQ96PU8 341 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEC13-210ENST00000428626 ZPBPQ9BS86 351 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 WASH6PQ9NQA3 447 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 POT1Q9NUX5 634 aa15.24■□□□□ 0.03
SEC13-210ENST00000428626 KLHL8Q9P2G9 620 aaPredicted RBP15.24■□□□□ 0.03
SEC13-210ENST00000428626 RELNP78509 3460 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 EPOP01588 193 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 TPM1P09493 284 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 SFTPCP11686 197 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 AMD1P17707 334 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 IDSP22304 550 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 SPAM1P38567 509 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 MAGEA1P43355 309 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 CAPZBP47756 277 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 FOXM1Q08050 763 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 CDC20Q12834 499 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 KCNAB2Q13303 367 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 ODF2Q5BJF6 829 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 TFDP3Q5H9I0 405 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 GPRC6AQ5T6X5 926 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 ATG14Q6ZNE5 492 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 MICALCLQ6ZW33 695 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 PID1Q7Z2X4 250 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 CNGA4Q8IV77 575 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 KATNAL2Q8IYT4 538 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 GDAP1Q8TB36 358 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 BLOC1S5Q8TDH9 187 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 P3H4Q92791 437 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 ADNPQ9H2P0 1102 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 TRABDQ9H4I3 376 aa15.23■□□□□ 0.03
SEC13-210ENST00000428626 ZNF768Q9H5H4 540 aaKnown RBP15.23■□□□□ 0.03
SEC13-210ENST00000428626 MAST4O15021 2626 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 COL12A1Q99715 3063 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 RCCD1A6NED2 376 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 OR2AG2A6NM03 316 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 POP7O75817 140 aaKnown RBP15.22■□□□□ 0.03
SEC13-210ENST00000428626 TIAF1O95411 115 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 LCA5LO95447 670 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 AGTP01019 485 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 CSRP3P50461 194 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 NFE2L1Q14494 772 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 CERS6Q6ZMG9 384 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 FAM92BQ6ZTR7 304 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 BBS12Q6ZW61 710 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 BZW1Q7L1Q6 419 aaKnown RBP15.22■□□□□ 0.03
SEC13-210ENST00000428626 GLT6D1Q7Z4J2 308 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 PRSS42Q7Z5A4 293 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 BEND7Q8N7W2 519 aaPredicted RBP15.22■□□□□ 0.03
SEC13-210ENST00000428626 DDHD1Q8NEL9 900 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 DTX3LQ8TDB6 740 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 KLHL6Q8WZ60 621 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 STARD8Q92502 1023 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 CXorf40BQ96DE9 158 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 ELMO2Q96JJ3 720 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 OR6C1Q96RD1 312 aa15.22■□□□□ 0.03
SEC13-210ENST00000428626 SRPK1Q96SB4 655 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms