RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PDX1P52945 283 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 LIMK2P53671 638 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 INHBCP55103 352 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 GDF10P55107 478 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 SARNPP82979 210 aaKnown RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 PTPRRQ15256 657 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 GPRC6AQ5T6X5 926 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 METRNLQ641Q3 311 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 AADACL2Q6P093 401 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CYB5D1Q6P9G0 228 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 AMZ2Q86W34 360 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF547Q8IVP9 402 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 REXO1L1PQ8IX06 675 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 NXPE1Q8N323 547 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CCDC89Q8N998 374 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 LSM14AQ8ND56 463 aaKnown RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 OR4K2Q8NGD2 314 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 OR2L2Q8NH16 312 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CCL4L1Q8NHW4 92 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 SMIM14Q96QK8 99 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 TTC1Q99614 292 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CMKLR1Q99788 373 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ZPBPQ9BS86 351 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CCM2Q9BSQ5 444 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 IL22Q9GZX6 179 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ASCL3Q9NQ33 180 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 CASS4Q9NQ75 786 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 AKAP7Q9P0M2 348 aaPredicted RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 GULP1Q9UBP9 304 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 ZNHIT2Q9UHR6 403 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 TMPRSS11EQ9UL52 423 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM98Q9Y2Y6 226 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 RNF215Q9Y6U7 377 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 MN1Q10571 1320 aaPredicted RBP9□□□□□ -0.97
SMC1A-203ENST00000428014 ZZEF1O43149 2961 aa9□□□□□ -0.97
SMC1A-203ENST00000428014 IGHV1OR21-1A0A087WYE8 117 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TCRBV7S2A1N4TA0A589 114 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 MAGEB16A2A368 324 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 SRRM3A6NNA2 597 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 B4E171 279 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 PLD2O14939 933 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 INPP4BO15327 924 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 DUX1O43812 170 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ATP1A1P05023 1023 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 RPLP0P05388 317 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 PIRTP0C851 137 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 SPINK2P20155 84 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 AK4P27144 223 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TSPAN7P41732 249 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 NSG1P42857 185 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 POLD2P49005 469 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 NPY2RP49146 381 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ADARP55265 1226 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 HHEXQ03014 270 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 CACNG1Q06432 222 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 CBLBQ13191 982 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 LLGL1Q15334 1064 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 CHRNA6Q15825 494 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 AARS2Q5JTZ9 985 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TMEM71Q6P5X7 295 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 KLHL35Q6PF15 583 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 SLC30A9Q6PML9 568 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 CHST15Q7LFX5 561 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ZNF248Q8NDW4 579 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 MCUQ8NE86 351 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 OR10G6Q8NH81 332 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 SLC37A2Q8TED4 501 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 GRK7Q8WTQ7 553 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 PRR11Q96HE9 360 aaPredicted RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 CDKN2AIPNLQ96HQ2 116 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 RUNDC3BQ96NL0 473 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TEFMQ96QE5 360 aaKnown RBP8.99□□□□□ -0.97
SMC1A-203ENST00000428014 COPS8Q99627 209 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 OR2AG1Q9H205 316 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ASB8Q9H765 288 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ZDHHC3Q9NYG2 299 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 TBC1D29Q9UFV1 150 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 MOSPD1Q9UJG1 213 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 HEBP2Q9Y5Z4 205 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 ARL5AQ9Y689 179 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 SLC30A1Q9Y6M5 507 aa8.99□□□□□ -0.97
SMC1A-203ENST00000428014 GOLGA6L10A0A0M3HER8 536 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 A0A0U1RQS6 177 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 B4DGG1 531 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PGRMC1O00264 195 aaKnown RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 TAF4O00268 1085 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 MATN2O00339 956 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 NDC80O14777 642 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 PPM1DO15297 605 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 RRP8O43159 456 aaKnown RBP8.98□□□□□ -0.97
SMC1A-203ENST00000428014 B4GAT1O43505 415 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 USP12O75317 370 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 C9P02748 559 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 MSL3P1P0C860 447 aa8.98□□□□□ -0.97
SMC1A-203ENST00000428014 THRAP10827 490 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms