RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ACSL6Q9UKU0 697 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 PCDHB11Q9Y5F2 797 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 CAPN6Q9Y6Q1 641 aa18.14■□□□□ 0.49
GPC1-205ENST00000427506 C9orf172C9J069 976 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 KRT86O43790 486 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 PRAMEF1O95521 474 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 LIPCP11150 499 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 FGF3P11487 239 aaPredicted RBP18.13■□□□□ 0.49
GPC1-205ENST00000427506 MSH3P20585 1137 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 DRG2P55039 364 aaKnown RBP18.13■□□□□ 0.49
GPC1-205ENST00000427506 UBE2IP63279 158 aaKnown RBP18.13■□□□□ 0.49
GPC1-205ENST00000427506 PDE1BQ01064 536 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 SPARCL1Q14515 664 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 TMEM220Q6QAJ8 160 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 ZFAND4Q86XD8 727 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 RASGEF1AQ8N9B8 481 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 DDHD1Q8NEL9 900 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 CXorf40BQ96DE9 158 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 HES6Q96HZ4 224 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 TAAR9Q96RI9 348 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 EPB41L1Q9H4G0 881 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 KLHL3Q9UH77 587 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 KCTD3Q9Y597 815 aa18.13■□□□□ 0.49
GPC1-205ENST00000427506 ZFC3H1O60293 1989 aaKnown RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 SCN8AQ9UQD0 1980 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 LILRA5A6NI73 299 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 OR2AG2A6NM03 316 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 EFCAB7A8K855 629 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 GAPDHSO14556 408 aaPredicted RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 KCNJ13O60928 360 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 POP7O75817 140 aaKnown RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 CD82P27701 267 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 SLC19A1P41440 591 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 HALP42357 657 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 TMPRSS15P98073 1019 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 KLF1Q13351 362 aaPredicted RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 PARP6Q2NL67 630 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 SEL1L2Q5TEA6 688 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 ABRAXAS1Q6UWZ7 409 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 C11orf96Q7Z7L8 435 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 AMZ2Q86W34 360 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 ART4Q93070 314 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 B3GNT4Q9C0J1 378 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 ASB8Q9H765 288 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 SLC39A1Q9NY26 324 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 ZNF624Q9P2J8 865 aaPredicted RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 FKBPLQ9UIM3 349 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 R3HDM2Q9Y2K5 976 aaKnown RBP18.12■□□□□ 0.49
GPC1-205ENST00000427506 SSUH2Q9Y2M2 353 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 CACNA1GO43497 2377 aa18.12■□□□□ 0.49
GPC1-205ENST00000427506 K7ENP7 123 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 ATXN7O15265 892 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 SRP72O76094 671 aaKnown RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 AMD1P17707 334 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 PBLDP30039 288 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 CA5AP35218 305 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 CTSCP53634 463 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 RHDQ02161 417 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 LONRF2Q1L5Z9 754 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 TAF1BQ53T94 588 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 FNBP1LQ5T0N5 605 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 AGAP9Q5VTM2 703 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 INO80CQ6PI98 192 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 TMEM26Q6ZUK4 368 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 DET1Q7L5Y6 550 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 PLXDC1Q8IUK5 500 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 OR13C4Q8NGS5 318 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 SLC39A7Q92504 469 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 TMEM121Q9BTD3 319 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 UCK1Q9HA47 277 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 POT1Q9NUX5 634 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 OCIAD1Q9NX40 245 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 PDP2Q9P2J9 529 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 FEZ2Q9UHY8 353 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 CRLS1Q9UJA2 301 aa18.11■□□□□ 0.49
GPC1-205ENST00000427506 DNMT3AQ9Y6K1 912 aaPredicted RBP18.11■□□□□ 0.49
GPC1-205ENST00000427506 TCRBV7S2A1N4TA0A589 114 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 PRR19A6NJB7 356 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 OR52A4PA6NMU1 304 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 UBXN7O94888 489 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 METTL18O95568 372 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 BRAFP15056 766 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 TYRP1P17643 537 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 HADHAP40939 763 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 P3H1Q32P28 736 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 MANEAQ5SRI9 462 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 WASH2PQ6VEQ5 465 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 TAB3Q8N5C8 712 aaPredicted RBP18.1■□□□□ 0.49
GPC1-205ENST00000427506 DCUN1D1Q96GG9 259 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 ZNF514Q96K75 400 aaPredicted RBP18.1■□□□□ 0.49
GPC1-205ENST00000427506 LRRC40Q9H9A6 602 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 ARNT2Q9HBZ2 717 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 WASH6PQ9NQA3 447 aa18.1■□□□□ 0.49
GPC1-205ENST00000427506 B4E171 279 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 STMND1H3BQB6 276 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 ERVH48-1M5A8F1 160 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 ARHGAP6O43182 974 aa18.09■□□□□ 0.49
GPC1-205ENST00000427506 PSMD3O43242 534 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms