RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FCF1Q9Y324 198 aaKnown RBP13.25□□□□□ -0.29
USP42-203ENST00000426246 MYO16Q9Y6X6 1858 aa13.25□□□□□ -0.29
USP42-203ENST00000426246 ZNF487B1APH4 448 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 NEK2P51955 445 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 OXCT1P55809 520 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 IL5RAQ01344 420 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 HNRNPDQ14103 355 aaKnown RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 LRP8Q14114 963 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ACAP2Q15057 778 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 UAP1L1Q3KQV9 507 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 PIANPQ8IYJ0 282 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 HS6ST3Q8IZP7 471 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ATP6V0D2Q8N8Y2 350 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 CDKN2AIPNLQ96HQ2 116 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 MUS81Q96NY9 551 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 BEGAINQ9BUH8 593 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 WWOXQ9NZC7 414 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 GREB1Q4ZG55 1949 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 XYLBO75191 536 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 MTX2O75431 263 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 SLC22A3O75751 556 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 OAZ2O95190 189 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 B3GALT4O96024 378 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 POLR2IP36954 125 aaKnown RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 HERVK_113P63132 956 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 MERTKQ12866 999 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 SEMA3BQ13214 749 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 GTDC1Q4AE62 458 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 PM20D1Q6GTS8 502 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ZNF549Q6P9A3 640 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 PGBD5Q8N414 524 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 STAG3L4Q8TBR4 150 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ERVK-6Q9BXR3 956 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 PTTG2Q9NZH5 202 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 LRFN2Q9ULH4 789 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 PRSS51A0A1B0GVH4 220 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 VPS26AO75436 327 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 CHRM1P11229 460 aaPredicted RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 PRDX6P30041 224 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 SLC7A1P30825 629 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 HPCAP84074 193 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 HSPA14Q0VDF9 509 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 ADGRG6Q86SQ4 1221 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 CPSF7Q8N684 471 aaKnown RBP13.24□□□□□ -0.29
USP42-203ENST00000426246 ZBED2Q9BTP6 218 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 MAP10Q9P2G4 905 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 IKZF3Q9UKT9 509 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 INVSQ9Y283 1065 aa13.24□□□□□ -0.29
USP42-203ENST00000426246 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 NPHS1O60500 1241 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 PQBP1O60828 265 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 CYBBP04839 570 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 G6PDP11413 515 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 HSPA13P48723 471 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 CHRNB3Q05901 458 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 PMS2P3Q13401 168 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 EIF4EBP2Q13542 120 aaPredicted RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 SLC39A5Q6ZMH5 540 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 SCLYQ96I15 445 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 RNF208Q9H0X6 261 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 UTS2RQ9UKP6 389 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 NINQ8N4C6 2090 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 CPSF4O95639 269 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 RHOCP08134 193 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 HSPA1AP0DMV8 641 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 HSPA1BP0DMV9 641 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 EGFL6Q8IUX8 553 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 ZFAND2BQ8WV99 257 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 MYLIPQ8WY64 445 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 MIR1-1HGQ9H1L0 117 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
USP42-203ENST00000426246 WBP1LQ9NX94 342 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 NDUFA13Q9P0J0 144 aa13.23□□□□□ -0.29
USP42-203ENST00000426246 FGF10O15520 208 aaPredicted RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 EFEMP2O95967 443 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 AHI1Q8N157 1196 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 SCML4Q8N228 414 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 ASIC4Q96FT7 647 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 FAR2Q96K12 515 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 TUBB1Q9H4B7 451 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 RIBC2Q9H4K1 309 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
USP42-203ENST00000426246 K7ERQ8 282 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 AP3B1O00203 1094 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 GJB5O95377 273 aa13.22□□□□□ -0.29
USP42-203ENST00000426246 C1RP00736 705 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms