RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 NDUFA10O95299 355 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 CASRP41180 1078 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 SH3BP2P78314 561 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 GPR18Q14330 331 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 IL11RAQ14626 422 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ASTE1Q2TB18 679 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ATP13A5Q4VNC0 1218 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
COL18A1-205ENST00000423214 CRTC2Q53ET0 693 aaPredicted RBP15.87■□□□□ 0.13
COL18A1-205ENST00000423214 TEX44Q53QW1 395 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ATP1A1-AS1Q5TC04 95 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 LRRC38Q5VT99 294 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 CACHD1Q5VU97 1274 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 BZW1Q7L1Q6 419 aaKnown RBP15.87■□□□□ 0.13
COL18A1-205ENST00000423214 PRSS42Q7Z5A4 293 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 RHOT1Q8IXI2 618 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 GALNT6Q8NCL4 622 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 TADA1Q96BN2 335 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ZDHHC12Q96GR4 267 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ELMO2Q96JJ3 720 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 ABHD10Q9NUJ1 306 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 SPTLC3Q9NUV7 552 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 TRIM10Q9UDY6 481 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 CROTQ9UKG9 612 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 KCTD3Q9Y597 815 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 SPO11Q9Y5K1 396 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 PIKFYVEQ9Y2I7 2098 aa15.87■□□□□ 0.13
COL18A1-205ENST00000423214 LRRK2Q5S007 2527 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 SPOPO43791 374 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 BRAFP15056 766 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 ZNF28P17035 718 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 PTPN3P26045 913 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 AGAP9Q5VTM2 703 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 ZDHHC20Q5W0Z9 365 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 ABRAXAS1Q6UWZ7 409 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 FAM92BQ6ZTR7 304 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 PPP1R3BQ86XI6 285 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 ZNF547Q8IVP9 402 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 BRSK1Q8TDC3 778 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 TFB1MQ8WVM0 346 aaKnown RBP15.86■□□□□ 0.13
COL18A1-205ENST00000423214 ABHD17AQ96GS6 310 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 CCDC42Q96M95 316 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 TRABDQ9H4I3 376 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 SLC40A1Q9NP59 571 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 FAM153AQ9UHL3 310 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 KCND3Q9UK17 655 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 COL12A1Q99715 3063 aa15.86■□□□□ 0.13
COL18A1-205ENST00000423214 PRR19A6NJB7 356 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 AURKAO14965 403 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 MTSS1O43312 755 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 MFAP3LO75121 409 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 KATNA1O75449 491 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 NFKB1P19838 968 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 HMGCLP35914 325 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 SPAM1P38567 509 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 SLC1A1P43005 524 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 TMEM115Q12893 351 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-205ENST00000423214 TFDP2Q14188 446 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 PLCL1Q15111 1095 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 PRKD1Q15139 912 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-205ENST00000423214 PPP2R5EQ16537 467 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 KAZNQ674X7 775 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 WASH2PQ6VEQ5 465 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 GLT6D1Q7Z4J2 308 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 TEKT5Q96M29 485 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 NHEJ1Q9H9Q4 299 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-205ENST00000423214 WASH6PQ9NQA3 447 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 HACD3Q9P035 362 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 KLHL8Q9P2G9 620 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-205ENST00000423214 POLHQ9Y253 713 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 TP53TG5Q9Y2B4 290 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 HYOU1Q9Y4L1 999 aa15.85■□□□□ 0.13
COL18A1-205ENST00000423214 F5H423 210 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-205ENST00000423214 MKRN2OSH3BPM6 223 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 KIF1CO43896 1103 aaKnown RBP15.84■□□□□ 0.13
COL18A1-205ENST00000423214 MT-ND3P03897 115 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 CCNYL3P0C7X3 344 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 F8A1P23610 371 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 PBLDP30039 288 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-205ENST00000423214 NR2C2P49116 596 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 WNT3AP56704 352 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 TUBB3Q13509 450 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 ITGA9Q13797 1035 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 ERV3-1Q14264 604 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 NOMO1Q15155 1222 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 LDLRAP1Q5SW96 308 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 KLHL35Q6PF15 583 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 MFSD7Q6UXD7 560 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 FAM151BQ6UXP7 276 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 C11orf96Q7Z7L8 435 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 AMZ2Q86W34 360 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 SLC25A41Q8N5S1 370 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 SIDT2Q8NBJ9 832 aaKnown RBP15.84■□□□□ 0.13
COL18A1-205ENST00000423214 BLOC1S5Q8TDH9 187 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 FSD1LQ9BXM9 530 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 PDE7BQ9NP56 450 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL18A1-205ENST00000423214 TMPRSS11EQ9UL52 423 aa15.84■□□□□ 0.13
COL18A1-205ENST00000423214 PKP3Q9Y446 797 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms