RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 RNASEH2BQ5TBB1 312 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 RBM44Q6ZP01 1051 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CCDC25Q86WR0 208 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 TRIM48Q8IWZ4 208 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 PPIL6Q8IXY8 311 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 GPR156Q8NFN8 814 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 OR6C4Q8NGE1 309 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 NAT14Q8WUY8 206 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ZCCHC14Q8WYQ9 949 aaKnown RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 CPT1BQ92523 772 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ULK4Q96C45 1275 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 SCARF2Q96GP6 870 aaPredicted RBP9.54□□□□□ -0.88
HERC3-204ENST00000422770 ARNT2Q9HBZ2 717 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 RABGEF1Q9UJ41 708 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ANAPC5Q9UJX4 755 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 NFU1Q9UMS0 254 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 WASF3Q9UPY6 502 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 PIKFYVEQ9Y2I7 2098 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 ASXL3Q9C0F0 2248 aa9.54□□□□□ -0.88
HERC3-204ENST00000422770 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 TCRBV7S3A2A0A539 114 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 HEATR9A2RTY3 570 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 OR51F1A6NGY5 319 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 GPR89AB7ZAQ6 455 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 GAPDHSO14556 408 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 CASC3O15234 703 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 ZW10O43264 779 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 LDB2O43679 373 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 GPR89BP0CG08 455 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 MYBL2P10244 700 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 GLB1P16278 677 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 MCM3P25205 808 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 RPL10P27635 214 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 TNFRSF8P28908 595 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CA5AP35218 305 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 DRG2P55039 364 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 PRAMEP78395 509 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CRADDP78560 199 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CCL7P80098 99 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 SARNPP82979 210 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 MORF4L2Q15014 288 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 SKIDA1Q1XH10 827 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CASC4Q6P4E1 433 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 TMEM220Q6QAJ8 160 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 ZDHHC24Q6UX98 284 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 CCNI2Q6ZMN8 369 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 SNX20Q7Z614 316 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 NAGSQ8N159 534 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 ARL14Q8N4G2 192 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 RASGEF1AQ8N9B8 481 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 BBOF1Q8ND07 529 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 DDHD1Q8NEL9 900 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 OR6P1Q8NGX9 317 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 MDM1Q8TC05 714 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 FBXO25Q8TCJ0 367 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 STYXQ8WUJ0 223 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.53□□□□□ -0.88
HERC3-204ENST00000422770 AHCYL2Q96HN2 611 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 FMO2Q99518 471 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 PARD6BQ9BYG5 372 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 LRRN3Q9H3W5 708 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 PRDM8Q9NQV8 689 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 NLE1Q9NVX2 485 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 WDR70Q9NW82 654 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 WHRNQ9P202 907 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 TBC1D29Q9UFV1 150 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 MTRF1LQ9UGC7 380 aaKnown RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 TMPRSS11EQ9UL52 423 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 ATXN7L1Q9ULK2 861 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 PSMD13Q9UNM6 376 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 PCDHB1Q9Y5F3 818 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 KIF26BQ2KJY2 2108 aa9.53□□□□□ -0.88
HERC3-204ENST00000422770 COL27A1Q8IZC6 1860 aaPredicted RBP9.53□□□□□ -0.88
HERC3-204ENST00000422770 UNC13CQ8NB66 2214 aa9.52□□□□□ -0.88
HERC3-204ENST00000422770 TRABD2BA6NFA1 517 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 CHUKO15111 745 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 NUDT21O43809 227 aaKnown RBP9.52□□□□□ -0.89
HERC3-204ENST00000422770 BANF1O75531 89 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 SUN1O94901 812 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 EML2O95834 649 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 PRSS56P0CW18 603 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 F3P13726 295 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 TPSB2P20231 275 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 IDSP22304 550 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 IVDP26440 423 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 ECHS1P30084 290 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 HALP42357 657 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 CDKN1CP49918 316 aaPredicted RBP9.52□□□□□ -0.89
HERC3-204ENST00000422770 CTSCP53634 463 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 OR1D5P58170 312 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 HHEXQ03014 270 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 CACNG1Q06432 222 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
HERC3-204ENST00000422770 TPSAB1Q15661 275 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms