RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 USP41Q3LFD5 358 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 RFTN2Q52LD8 501 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ADGRF1Q5T601 910 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 OR4F6Q8NGB9 312 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 RANBP9Q96S59 729 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 RNF208Q9H0X6 261 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ATG10Q9H0Y0 220 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 MAGEH1Q9H213 219 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 PRSS51A0A1B0GVH4 220 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 A0A1W2PRU2 124 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ARPC2O15144 300 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 MAN1A2O60476 641 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 SLC22A3O75751 556 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 IL10P22301 178 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 PCSK6P29122 969 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 IL12AP29459 219 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 GSK3BP49841 420 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CSRP3P50461 194 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CDH4P55283 916 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 OR4D2P58180 307 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ABRAXAS2Q15018 415 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 AP1ARQ63HQ0 302 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TTC33Q6PID6 262 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TEX26Q8N6G2 289 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 OR2T34Q8NGX1 318 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 KIAA1191Q96A73 305 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CAPNS2Q96L46 248 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ALG2Q9H553 416 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 GPBP1L1Q9HC44 474 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 IGLV3-10A0A075B6K4 115 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 KERAO60938 352 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CLDN11O75508 207 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF140P52738 457 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 KLHDC10Q6PID8 442 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 NPAS4Q8IUM7 802 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 BEND7Q8N7W2 519 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
MCF2L-213ENST00000421756 CD200R1Q8TD46 325 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 RNF11Q9Y3C5 154 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
MCF2L-213ENST00000421756 ATG2BQ96BY7 2078 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 MYO16Q9Y6X6 1858 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 A0A1B0GVM2 712 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ZBBXA8MT70 800 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 GNGT2O14610 69 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 SEC22BO75396 215 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ZNF26P17031 533 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ITPKAP23677 461 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 MAPKAPK2P49137 400 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 POLR2JP52435 117 aaKnown RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 OTOP2Q7RTS6 562 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 CMTR2Q8IYT2 770 aaKnown RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ADNPQ9H2P0 1102 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ZDHHC6Q9H6R6 413 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 CFAP97Q9P2B7 532 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 UTS2RQ9UKP6 389 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 WASH4PA8MWX3 477 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 GSTA4O15217 222 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 PAPSS2O95340 614 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 SMIM18P0DKX4 95 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 PRKACGP22612 351 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 AKT1P31749 480 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 TAF1AQ15573 450 aaPredicted RBP13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ADGRG6Q86SQ4 1221 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 GALNT15Q8N3T1 639 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 ADCY4Q8NFM4 1077 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 PPP1R2P1Q96PQ5 205 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 MGME1Q9BQP7 344 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 FEM1AQ9BSK4 669 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 PDFQ9HBH1 243 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 AASSQ9UDR5 926 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 F5P12259 2224 aa13.18□□□□□ -0.3
MCF2L-213ENST00000421756 TYW5A2RUC4 315 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 NOBOXO60393 691 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 RSL1D1O76021 490 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 FESP07332 822 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 PBLDP30039 288 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 PIGFQ07326 219 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 CHRNA6Q15825 494 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 C6orf136Q5SQH8 315 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 CWF19L1Q69YN2 538 aaKnown RBP13.17□□□□□ -0.3
MCF2L-213ENST00000421756 GCNT7Q6ZNI0 430 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
MCF2L-213ENST00000421756 CLEC4FQ8N1N0 589 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms