RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 BBS5Q8N3I7 341 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 BPIFB6Q8NFQ5 453 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 PAIP1Q9H074 479 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 FARSBQ9NSD9 589 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AIG1Q9NVV5 245 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ABCD2Q9UBJ2 740 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AQP12BA6NM10 295 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 HNRNPCP07910 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RHOCP08134 193 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SLC2A4P14672 509 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 IL2P60568 153 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 NFKB2Q00653 900 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RAB39AQ14964 217 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 GTDC1Q4AE62 458 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 MBOAT1Q6ZNC8 495 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TAS1R1Q7RTX1 841 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AQP12AQ8IXF9 295 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 WBP2Q969T9 261 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 NCLNQ969V3 563 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AURKBQ96GD4 344 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 BOCQ9BWV1 1114 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TDRD1Q9BXT4 1180 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SMURF2Q9HAU4 748 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SMPD3Q9NY59 655 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AGO1Q9UL18 857 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 FCF1Q9Y324 198 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 KRT87PA6NCN2 255 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 J3QRK9 145 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ACOX3O15254 700 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ADAM12O43184 909 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 DFNA5O60443 496 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 KCNH1O95259 989 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 B3GALT4O96024 378 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ALBP02768 609 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 CAPNS1P04632 268 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 GSNP06396 782 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 FGF4P08620 206 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TCF3P15923 654 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 PRKACGP22612 351 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 HRH2P25021 359 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RFC2P35250 354 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 BNIP2Q12982 314 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 MYBPC3Q14896 1274 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TBC1D25Q3MII6 688 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RFTN2Q52LD8 501 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 CTSL3PQ5NE16 218 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 RTP2Q5QGT7 225 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 LCN8Q6JVE9 175 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 AFTPHQ6ULP2 937 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ITIH5Q86UX2 942 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SCML4Q8N228 414 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SFRP1Q8N474 314 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 OR56A4Q8NGH8 313 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 LINC01599Q8WXQ3 324 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 FBXL8Q96CD0 374 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 ITCHQ96J02 903 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 UHRF1Q96T88 793 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 HACD3Q9P035 362 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 SEPT3Q9UH03 358 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 LEF1Q9UJU2 399 aaPredicted RBP11.76□□□□□ -0.53
LIMK1-202ENST00000418310 DOLKQ9UPQ8 538 aa11.76□□□□□ -0.53
LIMK1-202ENST00000418310 LCHNA4D1U4 455 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 MTMR11A4FU01 709 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 GNGT2O14610 69 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 INSIG1O15503 277 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ESRRBO95718 433 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 HSD17B1P14061 328 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 HMOX2P30519 316 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ZNF140P52738 457 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PRKCZQ05513 592 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 RCAN2Q14206 197 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 TGFBIQ15582 683 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ADRM1Q16186 407 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 USP41Q3LFD5 358 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 AARS2Q5JTZ9 985 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 MFSD14CQ5VZR4 134 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 RNF219Q5W0B1 726 aaPredicted RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 C17orf99Q6UX52 265 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 HACD2Q6Y1H2 254 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 Q6ZSR9 355 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 BEND5Q7L4P6 421 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ERI1Q8IV48 349 aaKnown RBP11.75□□□□□ -0.53
LIMK1-202ENST00000418310 PHACTR4Q8IZ21 702 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 DTWD1Q8N5C7 304 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 SEPT8Q92599 483 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 BIRC8Q96P09 236 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 DGCR6LQ9BY27 220 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 GPR63Q9BZJ6 419 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 DERL2Q9GZP9 239 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 AASSQ9UDR5 926 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 ANGPTL3Q9Y5C1 460 aa11.75□□□□□ -0.53
LIMK1-202ENST00000418310 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms