RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 PLRG1O43660 514 aaKnown RBP20.51■□□□□ 0.87
CASC3-203ENST00000418132 TRIM16O95361 564 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 KCNC1P48547 511 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 OCRLQ01968 901 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 LIPMQ5VYY2 423 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 CCT6BQ92526 530 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 LINGO1Q96FE5 620 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 SIPA1Q96FS4 1042 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 C7orf26Q96N11 449 aa20.51■□□□□ 0.87
CASC3-203ENST00000418132 MBD1Q9UIS9 605 aaPredicted RBP20.51■□□□□ 0.87
CASC3-203ENST00000418132 CCDC189A1A4V9 331 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 IGLON5A6NGN9 336 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 H2AFYO75367 372 aaKnown RBP20.5■□□□□ 0.87
CASC3-203ENST00000418132 MTX2O75431 263 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 TM7SF2O76062 418 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 AP2A2O94973 939 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 PCDH8O95206 1070 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ITGB6P18564 788 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 MSH3P20585 1137 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ATP5F1P24539 256 aaPredicted RBP20.5■□□□□ 0.87
CASC3-203ENST00000418132 PRKCQQ04759 706 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ZP2Q05996 745 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 TTC31Q49AM3 519 aaPredicted RBP20.5■□□□□ 0.87
CASC3-203ENST00000418132 PHYKPLQ8IUZ5 450 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ZNF687Q8N1G0 1237 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 GANCQ8TET4 914 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 SGF29Q96ES7 293 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 MRGPRX1Q96LB2 322 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 C20orf27Q9GZN8 174 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 THAP1Q9NVV9 213 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 SORCS3Q9UPU3 1222 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 TRPM6Q9BX84 2022 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 CCT8L1PA6NM43 557 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 K7ESM1 405 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 SGTAO43765 313 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 MAGEC1O60732 1142 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 CHRNB1P11230 501 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 GPR1P46091 355 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 OR4D1Q15615 310 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 CRY1Q16526 586 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 RAET1GQ6H3X3 334 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 USP30Q70CQ3 517 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ZBTB2Q8N680 514 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 ATOH8Q96SQ7 321 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 IKZF3Q9UKT9 509 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 FZD4Q9ULV1 537 aa20.5■□□□□ 0.87
CASC3-203ENST00000418132 SPRED3Q2MJR0 410 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 KBTBD6Q86V97 674 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 STAG3L4Q8TBR4 150 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 CCDC126Q96EE4 140 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 GATA5Q9BWX5 397 aaPredicted RBP20.49■□□□□ 0.87
CASC3-203ENST00000418132 KDM4CQ9H3R0 1056 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 ARHGEF3Q9NR81 526 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 CA14Q9ULX7 337 aa20.49■□□□□ 0.87
CASC3-203ENST00000418132 ZFR2Q9UPR6 939 aaKnown RBP20.49■□□□□ 0.87
CASC3-203ENST00000418132 F8W8V4 182 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 QSOX1O00391 747 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 INPP4BO15327 924 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 KERAO60938 352 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 DGKAP23743 735 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 DNAJB13P59910 316 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 ASPHQ12797 758 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 SEL1L3Q68CR1 1132 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 NAPRTQ6XQN6 538 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 DET1Q7L5Y6 550 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 SPATA21Q7Z572 469 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 OR14C36Q8NHC7 312 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 ZNF395Q9H8N7 513 aaPredicted RBP20.48■□□□□ 0.87
CASC3-203ENST00000418132 NEMP2A6NFY4 417 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 A8MT66 165 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 CDC7O00311 574 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 TGDSO95455 350 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 NDUFV2P19404 249 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 CCR7P32248 378 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 SLC1A6P48664 564 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 RGS4P49798 205 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 ADPRHP54922 357 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 TMEM115Q12893 351 aaPredicted RBP20.48■□□□□ 0.87
CASC3-203ENST00000418132 TSNQ15631 228 aaKnown RBP20.48■□□□□ 0.87
CASC3-203ENST00000418132 TTLL9Q3SXZ7 439 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 ZNF648Q5T619 568 aaPredicted RBP20.48■□□□□ 0.87
CASC3-203ENST00000418132 KIAA1161Q6NSJ0 714 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 Q6ZS52 159 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 SYNPOQ8N3V7 929 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 RASGEF1AQ8N9B8 481 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 MAFAQ8NHW3 353 aaPredicted RBP20.48■□□□□ 0.87
CASC3-203ENST00000418132 C1QTNF2Q9BXJ5 285 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 RASSF4Q9H2L5 321 aa20.48■□□□□ 0.87
CASC3-203ENST00000418132 TMEM114B3SHH9 223 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 BTN3A1O00481 513 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 ITM2AO43736 263 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 FSBPO95073 299 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 AOAHP28039 575 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 ARRB2P32121 409 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 NAGLUP54802 743 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 ABCE1P61221 599 aaKnown RBP20.47■□□□□ 0.87
CASC3-203ENST00000418132 RPS21P63220 83 aaKnown RBP20.47■□□□□ 0.87
CASC3-203ENST00000418132 SFSWAPQ12872 951 aaKnown RBP20.47■□□□□ 0.87
CASC3-203ENST00000418132 WSCD2Q2TBF2 565 aa20.47■□□□□ 0.87
CASC3-203ENST00000418132 TMEM259Q4ZIN3 620 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms