RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 E9PBE3 544 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 KPNA3O00505 521 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 RAD51BO15315 384 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 KLHL41O60662 606 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 EEF1DP29692 281 aaKnown RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 GJA4P35212 333 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 OPRD1P41143 372 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 CLCQ05315 142 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 KDSRQ06136 332 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 RALGDSQ12967 914 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 CDC16Q13042 620 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 PDCD2Q16342 344 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF284Q2VY69 593 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 TTC31Q49AM3 519 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 METTL2BQ6P1Q9 378 aaKnown RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 FRA10AC1Q70Z53 315 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 HSD11B1LQ7Z5J1 315 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 TECPR1Q7Z6L1 1165 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 DCUN1D1Q96GG9 259 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 ABHD8Q96I13 439 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 VPS35Q96QK1 796 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 FAM126AQ9BYI3 521 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 WDR55Q9H6Y2 383 aaPredicted RBP16.57■□□□□ 0.24
SSBP3-205ENST00000417664 CD274Q9NZQ7 290 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 KIAA1549LQ6ZVL6 1849 aa16.57■□□□□ 0.24
SSBP3-205ENST00000417664 B2RBV5 119 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SDHDO14521 159 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 UBFD1O14562 309 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CEP290O15078 2479 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 GSC2O15499 205 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 DCXO43602 365 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CDK14O94921 469 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 ELFN1P0C7U0 828 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 LAMP2P13473 410 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 ATP1B2P14415 290 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 GRIA2P42262 883 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 BTKQ06187 659 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MESP2Q0VG99 397 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 LRRC73Q5JTD7 316 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CDKL4Q5MAI5 379 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SERPINA13PQ6UXR4 307 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 LIPIQ6XZB0 460 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PARS2Q7L3T8 475 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 EFL1Q7Z2Z2 1120 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CYP2U1Q7Z449 544 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 LONP2Q86WA8 852 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PARP9Q8IXQ6 854 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CHCHD4Q8N4Q1 142 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PDPRQ8NCN5 879 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PIP4K2CQ8TBX8 421 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF483Q8TF39 744 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 UTP4Q969X6 686 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MYADMQ96S97 322 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 S1PR5Q9H228 398 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MTG2Q9H4K7 406 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 RDH14Q9HBH5 336 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 THAP10Q9P2Z0 257 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 STK38LQ9Y2H1 464 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 OARD1Q9Y530 152 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 DOCK8Q8NF50 2099 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MUC22E2RYF6 1773 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 NEMP1O14524 444 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 NPC1O15118 1278 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 S100BP04271 92 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MTHFRP42898 656 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 COPAP53621 1224 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SH3BP2P78314 561 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 B4GALNT1Q00973 533 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 KLF10Q13118 480 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PCBP2Q15366 365 aaKnown RBP eCLIP16.56■□□□□ 0.244e-9■■■■■ 71.4
SSBP3-205ENST00000417664 LDLRAP1Q5SW96 308 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SBSNQ6UWP8 590 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 RFLNAQ6ZTI6 216 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 Q6ZVL8 140 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 TDHQ8IZJ6 230 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 ZNF366Q8N895 744 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 DDHD1Q8NEL9 900 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 LKAAEAR1Q8TD35 194 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 SUSD6Q92537 303 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MCUR1Q96AQ8 359 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CCDC97Q96F63 343 aaPredicted RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 MIPEPQ99797 713 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CADM1Q9BY67 442 aaKnown RBP16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PFDN4Q9NQP4 134 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
SSBP3-205ENST00000417664 PLXNB3Q9ULL4 1909 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 TMEM233B4DJY2 109 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 C1QTNF3-AMACRE9PGA6 284 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 GIPC1O14908 333 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 AZIN1O14977 448 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 KAT7O95251 611 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 THRAP10827 490 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 HK3P52790 923 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 CDH13P55290 713 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 IRX1P78414 480 aaPredicted RBP16.55■□□□□ 0.24
SSBP3-205ENST00000417664 NAA25Q14CX7 972 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
SSBP3-205ENST00000417664 ITPRIPL2Q3MIP1 535 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms