RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ANKRD34CP0C6C1 535 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RNF224P0DH78 156 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 ACP5P13686 325 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 CDC25BP30305 580 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 ATP5OP48047 213 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RWDD2BP57060 319 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 QPCTQ16769 361 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 FHL5Q5TD97 284 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 C6orf15Q6UXA7 325 aaPredicted RBP13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RAD9BQ6WBX8 426 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 SLC9B2Q86UD5 537 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 SH3KBP1Q96B97 665 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 HAUS1Q96CS2 278 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 TEKT5Q96M29 485 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 VAT1Q99536 393 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RIOK2Q9BVS4 552 aaKnown RBP13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 GPR63Q9BZJ6 419 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 ZFYVE1Q9HBF4 777 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 RAD18Q9NS91 495 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 VPS4AQ9UN37 437 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 DUSP10Q9Y6W6 482 aa13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 MN1Q10571 1320 aaPredicted RBP13.04□□□□□ -0.32
CTHRC1-202ENST00000415886 NBASA2RRP1 2371 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 hCG_1818297A0A087WSY0 165 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 HACD1B0YJ81 288 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PMPCBO75439 489 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 DNAJB5O75953 348 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 KIAA0754O94854 1291 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 TJP3O95049 919 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 MMP2P08253 660 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 F3P13726 295 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PECAM1P16284 738 aaPredicted RBP13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 FECHP22830 423 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 STC1P52823 247 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PMS2P54278 862 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 SH3BP2P78314 561 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 GALNT3Q14435 633 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PPP2R5EQ16537 467 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 TAZQ16635 292 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PEX26Q7Z412 305 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 PLXDC1Q8IUK5 500 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 EFCAB3Q8N7B9 438 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 ACRBPQ8NEB7 543 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 STAMBPL1Q96FJ0 436 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 ELMO2Q96JJ3 720 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 C9orf72Q96LT7 481 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 LYSMD1Q96S90 227 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 HERPUD2Q9BSE4 406 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 OGFRQ9NZT2 677 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 VPS18Q9P253 973 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 CPNE7Q9UBL6 633 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 FAM153AQ9UHL3 310 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 TRHDEQ9UKU6 1024 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 ZNF106Q9H2Y7 1883 aaKnown RBP13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
CTHRC1-202ENST00000415886 KIR2DS5A0A0G2JLQ3 304 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 A0A0G2JNG1 304 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 RCCD1A6NED2 376 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 GOLGA6L9A6NEM1 432 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 LILRA5A6NI73 299 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 APOC4-APOC2K7ER74 178 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 KIR2DS3K7RE56 304 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 PJA2O43164 708 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 SEMA7AO75326 666 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 APOC2P02655 101 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 C9P02748 559 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 PTPN3P26045 913 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 MARCKSL1P49006 195 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 SEPHS1P49903 392 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 XRCC4Q13426 336 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 PRPSAP1Q14558 356 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 IHHQ14623 411 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 KIR2DS5Q14953 304 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 PRKD1Q15139 912 aaPredicted RBP13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 BBS12Q6ZW61 710 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 RASGRP3Q8IV61 690 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 GALNT11Q8NCW6 608 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 SPATA22Q8NHS9 363 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 CPT1CQ8TCG5 803 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 SSC4DQ8WTU2 575 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 KRT35Q92764 455 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 OR6C1Q96RD1 312 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 WDR24Q96S15 920 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 TRIM55Q9BYV6 548 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 OSBPL8Q9BZF1 889 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 TWSG1Q9GZX9 223 aa13.02□□□□□ -0.33
CTHRC1-202ENST00000415886 EPB41L1Q9H4G0 881 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms