RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 PACSIN1Q9BY11 444 aa18.98■□□□□ 0.63
UBXN4-202ENST00000415164 MAGEE1Q9HCI5 957 aa18.98■□□□□ 0.63
UBXN4-202ENST00000415164 PDE7BQ9NP56 450 aa18.98■□□□□ 0.63
UBXN4-202ENST00000415164 SLC40A1Q9NP59 571 aa18.98■□□□□ 0.63
UBXN4-202ENST00000415164 VEGFDO43915 354 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 PMPCBO75439 489 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 CREG1O75629 220 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 TIAF1O95411 115 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 MT-CYBP00156 380 aaPredicted RBP18.97■□□□□ 0.63
UBXN4-202ENST00000415164 H2AFZP0C0S5 128 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 FGF5P12034 268 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 TNNT1P13805 278 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 PLCL1Q15111 1095 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 ODF2Q5BJF6 829 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 CYB5D1Q6P9G0 228 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 H2AFVQ71UI9 128 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 RFX6Q8HWS3 928 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 ZNF547Q8IVP9 402 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 PLD5Q8N7P1 536 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 IMP4Q96G21 291 aaKnown RBP18.97■□□□□ 0.63
UBXN4-202ENST00000415164 LRRC4CQ9HCJ2 640 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 LHX9Q9NQ69 397 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 UVRAGQ9P2Y5 699 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 RARRES3Q9UL19 164 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 CAPN11Q9UMQ6 739 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 PSMD13Q9UNM6 376 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 WDR37Q9Y2I8 494 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 SPO11Q9Y5K1 396 aa18.97■□□□□ 0.63
UBXN4-202ENST00000415164 SPENQ96T58 3664 aaKnown RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 TTLL8A6PVC2 850 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 F5H423 210 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 AURKAO14965 403 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 PPP1R12AO14974 1030 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 VPS4BO75351 444 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 MT-ND3P03897 115 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 PBLDP30039 288 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 RPS18P62269 152 aaKnown RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 TMEM115Q12893 351 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 IQCB1Q15051 598 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 PDK1Q15118 436 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 ATP13A5Q4VNC0 1218 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 FAM199XQ6PEV8 388 aaPredicted RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 ABRAXAS1Q6UWZ7 409 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 RBM12BQ8IXT5 1001 aaKnown RBP18.96■□□□□ 0.63
UBXN4-202ENST00000415164 EFCAB3Q8N7B9 438 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 KLHL6Q8WZ60 621 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 RUFY1Q96T51 708 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 SLC25A51Q9H1U9 297 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 ACTL8Q9H568 366 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 VPS4AQ9UN37 437 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 NBASA2RRP1 2371 aa18.96■□□□□ 0.63
UBXN4-202ENST00000415164 KRT1P04264 644 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 NELFEP18615 380 aaKnown RBP18.95■□□□□ 0.62
UBXN4-202ENST00000415164 TNNT3P45378 269 aaPredicted RBP18.95■□□□□ 0.62
UBXN4-202ENST00000415164 PMS2P54278 862 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 CHAF1BQ13112 559 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 NOMO1Q15155 1222 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 LUZP1Q86V48 1076 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 GPR150Q8NGU9 434 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 DEF6Q9H4E7 631 aa18.95■□□□□ 0.62
UBXN4-202ENST00000415164 IGHV5-51A0A0C4DH38 117 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 NDST3O95803 873 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 EBLN1P0CF75 366 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 FOLR1P15328 257 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 PBX1P40424 430 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 UQCRFS1P47985 274 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 PPP2R5EQ16537 467 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 C4orf17Q53FE4 359 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 AGAP9Q5VTM2 703 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 PWWP2BQ6NUJ5 590 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 CERS6Q6ZMG9 384 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 SLC25A41Q8N5S1 370 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 RNF25Q96BH1 459 aaPredicted RBP18.94■□□□□ 0.62
UBXN4-202ENST00000415164 TRIM55Q9BYV6 548 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 GLOD4Q9HC38 313 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 IMP3Q9NV31 184 aaKnown RBP18.94■□□□□ 0.62
UBXN4-202ENST00000415164 NFKBIL1Q9UBC1 381 aaPredicted RBP18.94■□□□□ 0.62
UBXN4-202ENST00000415164 FAM8A1Q9UBU6 413 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 LCMT1Q9UIC8 334 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 TMPRSS11EQ9UL52 423 aa18.94■□□□□ 0.62
UBXN4-202ENST00000415164 A0A0A6YYK5 440 aaPredicted RBP18.93■□□□□ 0.62
UBXN4-202ENST00000415164 UBA6A0AVT1 1052 aaPredicted RBP18.93■□□□□ 0.62
UBXN4-202ENST00000415164 CLEC18AA5D8T8 446 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 ARGFXA6NJG6 315 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 OR2AG2A6NM03 316 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 AGFG2O95081 481 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 PDGFAP04085 211 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 GYPCP04921 128 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 DNTTIP2Q5QJE6 756 aaKnown RBP18.93■□□□□ 0.62
UBXN4-202ENST00000415164 CPZQ66K79 652 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 KLHL35Q6PF15 583 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 CLEC18BQ6UXF7 455 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 FAM151BQ6UXP7 276 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 WASH2PQ6VEQ5 465 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 AMZ2Q86W34 360 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 CLEC18CQ8NCF0 446 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 UBXN4Q92575 508 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 VPS35Q96QK1 796 aa18.93■□□□□ 0.62
UBXN4-202ENST00000415164 MAP3K3Q99759 626 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms