RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 IL17RCQ8NAC3 791 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 POC1AQ8NBT0 407 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 BBS10Q8TAM1 723 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 FEM1CQ96JP0 617 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 SLC22A12Q96S37 553 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 SEMA3CQ99985 751 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 HRH4Q9H3N8 390 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 RETREG1Q9H6L5 497 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 TCP11L1Q9NUJ3 509 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 RCC2Q9P258 522 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 RALYQ9UKM9 306 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 URB2Q14146 1524 aaKnown RBP3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 TOPBP1Q92547 1522 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRAG1Q86YV5 1406 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 CUL7Q14999 1698 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 CFAP43Q8NDM7 1665 aa3.68□□□□□ -1.82
HMGB1P11-201ENST00000413899 GOLGA3Q08378 1498 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRXQ9BXM0 1461 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 OR2A25A4D2G3 310 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 OR5K3A6NET4 321 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 HMGB1P1B2RPK0 211 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 ANKRD66B4E2M5 251 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 BUB3O43684 328 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 GJB3O75712 270 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 TUBBP07437 444 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PRLRP16471 622 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 ACSL1P33121 698 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 IL15P40933 162 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 DLX5P56178 289 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 COG7P83436 770 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PLIN5Q00G26 463 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 CXCL9Q07325 125 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE5Q13069 117 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 GAGE6Q13070 117 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PCLAFQ15004 111 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 WDR78Q5VTH9 848 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZDHHC20Q5W0Z9 365 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 KRT79Q5XKE5 535 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 CLEC4GQ6UXB4 293 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PLEKHM3Q6ZWE6 761 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF534Q76KX8 674 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 GALNT5Q7Z7M9 940 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 GSDMBQ8TAX9 411 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 SPATA20Q8TB22 786 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PHF21AQ96BD5 680 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 SAT2Q96F10 170 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 CALML4Q96GE6 196 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 CEP295NLQ96MC4 621 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 LRRC1Q9BTT6 524 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 TEX12Q9BXU0 123 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 LRRC4Q9HBW1 653 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PSD3Q9NYI0 1048 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 KLHL9Q9P2J3 617 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 POLG2Q9UHN1 485 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 TSPYL4Q9UJ04 414 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 TMEM5Q9Y2B1 443 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 PASKQ96RG2 1323 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 FANCD2Q9BXW9 1451 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 CEP164Q9UPV0 1460 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 RAPGEF2Q9Y4G8 1499 aa3.67□□□□□ -1.82
HMGB1P11-201ENST00000413899 LNP1A1A4G5 178 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 CTDSP2O14595 271 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 EIF3DO15371 548 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 WISP2O76076 250 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 PGM3O95394 542 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 MMP9P14780 707 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 AMD1P17707 334 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 GCH1P30793 250 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 ARCN1P48444 511 aaKnown RBP3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 SUOXP51687 545 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 NTRK2Q16620 822 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 MEP1AQ16819 746 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 CCDC96Q2M329 555 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF718Q3SXZ3 478 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 IRAK1BP1Q5VVH5 260 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 OR7E24Q6IFN5 339 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 C9orf139Q6ZV77 190 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF771Q7L3S4 317 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 DSG4Q86SJ6 1040 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 GALNT13Q8IUC8 556 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 C17orf53Q8N3J3 647 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 POC5Q8NA72 575 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 OSGEPL1Q9H4B0 414 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 RAD21L1Q9H4I0 556 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 PLSCR4Q9NRQ2 329 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 GIMAP4Q9NUV9 329 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 AMACRQ9UHK6 382 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 PLAGL1Q9UM63 463 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 PROCRQ9UNN8 238 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 ZNF711Q9Y462 761 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 SNX8Q9Y5X2 465 aa3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 POLA1P09884 1462 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P11-201ENST00000413899 WDR62O43379 1518 aa3.65□□□□□ -1.82
HMGB1P11-201ENST00000413899 ABCA10Q8WWZ4 1543 aa3.65□□□□□ -1.82
HMGB1P11-201ENST00000413899 TTC3P53804 2025 aa3.65□□□□□ -1.82
HMGB1P11-201ENST00000413899 ADAMTS12P58397 1594 aa3.65□□□□□ -1.82
HMGB1P11-201ENST00000413899 CEP162Q5TB80 1403 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 LOC100509620A0A075B734 347 aa3.65□□□□□ -1.83
HMGB1P11-201ENST00000413899 OR2M5A3KFT3 312 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms