RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PRAMEF1O95521 474 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CRTAMO95727 393 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 FGF3P11487 239 aaPredicted RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC2A4P14672 509 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 BRAFP15056 766 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 AMD1P17707 334 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CSTF2P33240 577 aaKnown RBP eCLIP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 FASLGP48023 281 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CDKN1CP49918 316 aaPredicted RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CLCNKAP51800 687 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 GPLD1P80108 840 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 XIAPP98170 497 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CLN3Q13286 438 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 NFE2L1Q14494 772 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 POU6F1Q14863 301 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 KIR2DS5Q14953 304 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 MEI1Q5TIA1 1274 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 IGF2-ASQ6U949 168 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 FAM83HQ6ZRV2 1179 aaPredicted RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 C11orf96Q7Z7L8 435 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 AMZ2Q86W34 360 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 FAM129CQ86XR2 697 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC13A5Q86YT5 568 aaPredicted RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 DDHD1Q8NEL9 900 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 OR4D9Q8NGE8 314 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 PMEPA1Q969W9 287 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 SH3KBP1Q96B97 665 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 LRRC45Q96CN5 670 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CXorf40BQ96DE9 158 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 DNAJC1Q96KC8 554 aaKnown RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CTRCQ99895 268 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 TIMM29Q9BSF4 260 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 CRLS1Q9UJA2 301 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC30A1Q9Y6M5 507 aa10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 URB1O60287 2271 aaKnown RBP10.01□□□□□ -0.81
NCKIPSD-202ENST00000413374 MYLKQ15746 1914 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 OR5K4A6NMS3 321 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 GPR89AB7ZAQ6 455 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 LDB2O43679 373 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 DUX1O43812 170 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 PPFIA2O75334 1257 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 POLBP06746 335 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCDC175P0C221 793 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZSCAN5DPP0CG00 497 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 GPR89BP0CG08 455 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 VCLP18206 1134 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 XRCC1P18887 633 aaPredicted RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 MC4RP32245 332 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CXCR5P32302 372 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 LMAN1P49257 510 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 TERF1P54274 439 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 UBE2IP63279 158 aaKnown RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCZ1BP86790 482 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCZ1P86791 482 aaPredicted RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 SQSTM1Q13501 440 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCDC38Q502W7 563 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 SOWAHCQ53LP3 525 aaPredicted RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZRANB3Q5FWF4 1079 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 KCTD11Q693B1 232 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 ABRAXAS1Q6UWZ7 409 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 TAS2R42Q7RTR8 314 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 GPR155Q7Z3F1 870 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CLEC14AQ86T13 490 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 DNAAF3Q8N9W5 541 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CCDC112Q8NEF3 446 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 OR52K1Q8NGK4 314 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 ART4Q93070 314 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 TMEM159Q96B96 161 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 DCUN1D1Q96GG9 259 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 TGM7Q96PF1 710 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 BBC3Q96PG8 261 aaPredicted RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 DPH1Q9BZG8 443 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 LRRC40Q9H9A6 602 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 ETNK1Q9HBU6 452 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 SLC39A1Q9NY26 324 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 PCDHGA7Q9Y5G6 932 aa10□□□□□ -0.81
NCKIPSD-202ENST00000413374 CFAP20Q9Y6A4 193 aaKnown RBP10□□□□□ -0.81
NCKIPSD-202ENST00000413374 LRP4O75096 1905 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 E7EVH7 732 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 NVLO15381 856 aaKnown RBP9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 PSMD3O43242 534 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 EFSO43281 561 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 UBXN7O94888 489 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 AP2A1O95782 977 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 THRAP10827 490 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 STIP1P31948 543 aaKnown RBP9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 GRIA1P42261 906 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 HALP42357 657 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 SEPHS1P49903 392 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 ZNF140P52738 457 aaPredicted RBP9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 GFERP55789 205 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 TMPRSS3P57727 454 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 TRA2AQ13595 282 aaKnown RBP eCLIP9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 CLPPQ16740 277 aaPredicted RBP9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 LONRF2Q1L5Z9 754 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 ANKS6Q68DC2 871 aa9.99□□□□□ -0.81
NCKIPSD-202ENST00000413374 PPP1R21Q6ZMI0 780 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms