RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SGCGQ13326 291 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 PTPRCAPQ14761 206 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 VWC2Q2TAL6 325 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TWISTNBQ3B726 338 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 FUT11Q495W5 492 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 EARS2Q5JPH6 523 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 HIST2H2BCQ6DN03 193 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 HIST2H2BDQ6DRA6 164 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 IRGCQ6NXR0 463 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 FBXO42Q6P3S6 717 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TEX38Q6PEX7 206 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 FBXO46Q6PJ61 603 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF788Q6ZQV5 615 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 QSOX2Q6ZRP7 698 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ZBTB49Q6ZSB9 765 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 MARK2Q7KZI7 788 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 HAUS6Q7Z4H7 955 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TSPAN33Q86UF1 283 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TIGD4Q8IY51 512 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 ADGRF4Q8IZF3 695 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 CADM3Q8N126 398 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 MIB2Q96AX9 1013 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 C5orf30Q96GV9 206 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SPATA13Q96N96 652 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 NUDCD1Q96RS6 583 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 FRMD8Q9BZ67 464 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 OSBPL8Q9BZF1 889 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TRIM6Q9C030 488 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 NT5C3AQ9H0P0 336 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 FZD8Q9H461 694 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SYTL2Q9HCH5 934 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SLC35D1Q9NTN3 355 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 DNAJC17Q9NVM6 304 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 LARSQ9P2J5 1176 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 COPG2Q9UBF2 871 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SPASTQ9UBP0 616 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 DNAJB4Q9UDY4 337 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 CTNNA3Q9UI47 895 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 GMEB2Q9UKD1 530 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 SNX7Q9UNH6 387 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 STRAPQ9Y3F4 350 aaKnown RBP4.48□□□□□ -1.69
BRCA1-204ENST00000412061 TEX264Q9Y6I9 313 aa4.48□□□□□ -1.69
BRCA1-204ENST00000412061 CYP2D7A0A087X1C5 515 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 A0A1W2PPM1 405 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 TYW5A2RUC4 315 aaKnown RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 DPPA5A6NC42 116 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MANSC4A6NHS7 340 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 C2CD4BA6NLJ0 364 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 FAM157AC9JC47 383 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 H0YIN7 160 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 NUDT3O95989 172 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PRKCGP05129 697 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 LCKP06239 509 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 CCDC192P0DO97 292 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PDHBP11177 359 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PCNAP12004 261 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PRLRP16471 622 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MYF6P23409 242 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 EPHB2P29323 1055 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PTGER1P34995 402 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MAGEA4P43358 317 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 GPR143P51810 404 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PROK1P58294 105 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 SORDQ00796 357 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 OASLQ15646 514 aaKnown RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 KRT24Q2M2I5 525 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 TCTN1Q2MV58 587 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 USP41Q3LFD5 358 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 AARDQ4LEZ3 155 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 ATP13A5Q4VNC0 1218 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 C6orf141Q5SZD1 244 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MIS18BP1Q6P0N0 1132 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 ZNF782Q6ZMW2 699 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 CCDC73Q6ZRK6 1079 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 NOXA1Q86UR1 476 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 IGFN1Q86VF2 1251 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 FAM219AQ8IW50 185 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 FBXW8Q8N3Y1 598 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 KIAA1524Q8TCG1 905 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 FAR1Q8WVX9 515 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 ROBO4Q8WZ75 1007 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 SHC3Q92529 594 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 BCL2L2Q92843 193 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 IGSF8Q969P0 613 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 ST6GALNAC6Q969X2 333 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 SPSB1Q96BD6 273 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 RRNAD1Q96FB5 475 aaKnown RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 ZC3HAV1LQ96H79 300 aaKnown RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 CLMNQ96JQ2 1002 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 PPIL3Q9H2H8 161 aaKnown RBP4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MINDY3Q9H8M7 445 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 MTMR10Q9NXD2 777 aa4.47□□□□□ -1.69
BRCA1-204ENST00000412061 P4HTMQ9NXG6 502 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms