RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TMEM156Q8N614 296 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 OR52J3Q8NH60 311 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF75CPQ92670 426 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 RPL10LQ96L21 214 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 MRPL57Q9BQC6 102 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 C11orf16Q9NQ32 467 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 PCDHGA12O60330 932 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 SELPP16109 830 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 PTPN4P29074 926 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 HKDC1Q2TB90 917 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 TMEM119Q4V9L6 283 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 RFWD3Q6PCD5 774 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 NAT14Q8WUY8 206 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 DKKL1Q9UK85 242 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ATP6AP2A0A1C7CYW4 349 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ATP6AP2O75787 350 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 KLK3P07288 261 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF20P17024 532 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 MTHFRP42898 656 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 IRAK1P51617 712 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 FPGSQ05932 587 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 IL18R1Q13478 541 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ABHD13Q7L211 337 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 LEF1Q9UJU2 399 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 OR4Q2P0C623 313 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 IL7RP16871 459 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 CDK7P50613 346 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ILF2Q12905 390 aaKnown RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 SLC9B1Q4ZJI4 515 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 FBXO25Q8TCJ0 367 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 C11orf24Q96F05 449 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 EVLQ9UI08 416 aaPredicted RBP11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ACTL7BQ9Y614 415 aa11.14□□□□□ -0.63
PRPF40A-202ENST00000410080 ARHGEF28Q8N1W1 1705 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 FOXR2Q6PJQ5 311 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GPR180Q86V85 440 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 FAM46DQ8NEK8 389 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 C12orf66Q96MD2 445 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 AIFM2Q9BRQ8 373 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TBL1XR1Q9BZK7 514 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GPN1Q9HCN4 374 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TFECO14948 347 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 FADS2O95864 444 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ACVR2AP27037 513 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 CLCN5P51795 746 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GRHL3Q8TE85 626 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 HEXDCQ8WVB3 486 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ACO2Q99798 780 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 OR51V1Q9H2C8 321 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TPK1Q9H3S4 243 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 AGO3Q9H9G7 860 aaKnown RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ABCB9Q9NP78 766 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 L1RE1Q9UN81 338 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 MDM4O15151 490 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PAPSS2O95340 614 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 BRCC3P46736 316 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SEPHS1P49903 392 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 UBXN11Q5T124 520 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 RADILQ96JH8 1075 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 COPS4Q9BT78 406 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PLCL2Q9UPR0 1127 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GLI1P08151 1106 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GLRA2P23416 452 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SELENOVP59797 346 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 C1QTNF8P60827 252 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SEMG2Q02383 582 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TOR1AIP1Q5JTV8 583 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 IQCHQ86VS3 1027 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 S100ZQ8WXG8 99 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 CAPNS2Q96L46 248 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 KLHL5Q96PQ7 755 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TAS2R14Q9NYV8 317 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 SIGLEC16A6NMB1 481 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 DISP2A7MBM2 1401 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 LRIG2O94898 1065 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 COL6A1P12109 1028 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 CASP5P51878 434 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 TXNDC11Q6PKC3 985 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GLIS3Q8NEA6 775 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 GPR151Q8TDV0 419 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 LMX1AQ8TE12 382 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 PLEKHG4BQ96PX9 1271 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 CDH19Q9H159 772 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 ZNF226Q9NYT6 803 aa11.13□□□□□ -0.63
PRPF40A-202ENST00000410080 IL36AQ9UHA7 158 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms