RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 DNMT3AQ9Y6K1 912 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-203ENST00000409783 FAM237BA0A1B0GVD1 139 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 CPED1A4D0V7 1026 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 EFCAB8A8MWE9 144 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 POP7O75817 140 aaKnown RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 ATP1B2P14415 290 aaPredicted RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 RPL21P46778 160 aaKnown RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 ARCN1P48444 511 aaKnown RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 MAZP56270 477 aaKnown RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 PRAMEP78395 509 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 CKAP4Q07065 602 aaKnown RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 DMPKQ09013 629 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 ITIH4Q14624 930 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 INSCQ1MX18 579 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 MSS51Q4VC12 460 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 CCDC157Q569K6 752 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 DHRS13Q6UX07 377 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 MAATS1Q7Z4T9 603 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 TMEM135Q86UB9 458 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 CHCHD4Q8N4Q1 142 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 BEND7Q8N7W2 519 aaPredicted RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 SNF8Q96H20 258 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 LINC00615Q96LM1 132 aaPredicted RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 FCRL3Q96P31 734 aaPredicted RBP22.01■■□□□ 1.11
PTCD3-203ENST00000409783 ERP44Q9BS26 406 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 TRIM31Q9BZY9 425 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 EVA1BQ9NVM1 165 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 RABGEF1Q9UJ41 708 aa22.01■■□□□ 1.11
PTCD3-203ENST00000409783 MAGEB16A2A368 324 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 PRLHRP49683 370 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 ITGA8P53708 1063 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 ANKRD20A4Q4UJ75 823 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 KIAA0930Q6ICG6 404 aaPredicted RBP22■■□□□ 1.11
PTCD3-203ENST00000409783 PACS1Q6VY07 963 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 FAM83HQ6ZRV2 1179 aaPredicted RBP22■■□□□ 1.11
PTCD3-203ENST00000409783 ARL14Q8N4G2 192 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 NAT6Q93015 286 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 DCUN1D1Q96GG9 259 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 PWWP2AQ96N64 755 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 PRDM8Q9NQV8 689 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 DNAJC16Q9Y2G8 782 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 SNX24Q9Y343 169 aa22■■□□□ 1.11
PTCD3-203ENST00000409783 ZCWPW2A0A1B0GU75 182 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CFAP99D6REC4 459 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 SMAPO00193 183 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CASC3O15234 703 aaKnown RBP21.99■■□□□ 1.11
PTCD3-203ENST00000409783 KCNJ13O60928 360 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 BANF1O75531 89 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 RALBP11234 206 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CDK4P11802 303 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 F3P13726 295 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 FOXC1Q12948 553 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 SMAD1Q15797 465 aaKnown RBP21.99■■□□□ 1.11
PTCD3-203ENST00000409783 ZNF658BQ4V348 819 aaPredicted RBP21.99■■□□□ 1.11
PTCD3-203ENST00000409783 FASTKD1Q53R41 847 aaKnown RBP21.99■■□□□ 1.11
PTCD3-203ENST00000409783 DUPD1Q68J44 220 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CASC4Q6P4E1 433 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 IYDQ6PHW0 289 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 AMZ2Q86W34 360 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 SFRP1Q8N474 314 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CLDN19Q8N6F1 224 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CCDC74AQ96AQ1 378 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CATSPERZQ9NTU4 200 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 SCHIP1Q9P0W5 487 aaPredicted RBP21.99■■□□□ 1.11
PTCD3-203ENST00000409783 SAMD15Q9P1V8 674 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 PRSS21Q9Y6M0 314 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 RNF215Q9Y6U7 377 aa21.99■■□□□ 1.11
PTCD3-203ENST00000409783 CD3EAPO15446 510 aaKnown RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 NUDT21O43809 227 aaKnown RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 HYAL3O43820 417 aaPredicted RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 OPA1O60313 960 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 VAPBO95292 243 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 BRAFP15056 766 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 GLB1P16278 677 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 CLDN6P56747 220 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 E2F1Q01094 437 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 INSM1Q01101 510 aaPredicted RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 DHX9Q08211 1270 aaKnown RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 TUBB2AQ13885 445 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 LYPLAL1Q5VWZ2 237 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 ABRAXAS1Q6UWZ7 409 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 WASH2PQ6VEQ5 465 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 CERS6Q6ZMG9 384 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 ZNF438Q7Z4V0 828 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 LDB1Q86U70 411 aaPredicted RBP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 OR6C4Q8NGE1 309 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 KIF18AQ8NI77 898 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 SLC37A2Q8TED4 501 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.98■■□□□ 1.11
PTCD3-203ENST00000409783 TUBB2BQ9BVA1 445 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 OSGEPL1Q9H4B0 414 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 WASH6PQ9NQA3 447 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 ANAPC5Q9UJX4 755 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 RPS6KL1Q9Y6S9 549 aa21.98■■□□□ 1.11
PTCD3-203ENST00000409783 TRBV23OR9-2A0A075B6M9 112 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 MGAT4DA6NG13 374 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 PPM1DO15297 605 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 OR1I1O60431 355 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 SNX2O60749 519 aa21.97■■□□□ 1.11
PTCD3-203ENST00000409783 AP2A2O94973 939 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms