RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 HNRNPA1L2Q32P51 320 aaKnown RBP13.92□□□□□ -0.18
LIMS2-206ENST00000409754 ATP13A5Q4VNC0 1218 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 SLC9B1Q4ZJI4 515 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 LRRC73Q5JTD7 316 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 RFLNAQ6ZTI6 216 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 CUZD1Q86UP6 607 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 YAF2Q8IY57 180 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 KIF2BQ8N4N8 673 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 AFAP1L2Q8N4X5 818 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 TMIEQ8NEW7 156 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 EEF1AKMT1Q8WVE0 214 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 EXT2Q93063 718 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 CCDC97Q96F63 343 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-206ENST00000409754 COPS8Q99627 209 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 SHCBP1LQ9BZQ2 653 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 EPHX3Q9H6B9 360 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 SARS2Q9NP81 518 aaKnown RBP13.92□□□□□ -0.18
LIMS2-206ENST00000409754 SMOXQ9NWM0 555 aa13.92□□□□□ -0.18
LIMS2-206ENST00000409754 IGLV3-16A0A075B6K0 115 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 SUPT3HB4E1H0 165 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 STX16-NPEPL1H3BU86 382 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 STX16O14662 325 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 SUPT3HO75486 399 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 SUPT7LO94864 414 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 GFAPP14136 432 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 AOC1P19801 751 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 OPRD1P41143 372 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 EIF2DP41214 584 aaKnown RBP13.91□□□□□ -0.18
LIMS2-206ENST00000409754 SOX9P48436 509 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 RALGDSQ12967 914 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 CRY1Q16526 586 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 PFKFB4Q16877 469 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 SH2D4BQ5SQS7 431 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 C9orf64Q5T6V5 341 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 ERAP2Q6P179 960 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 HSD11B1LQ7Z5J1 315 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 TREML1Q86YW5 311 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 FBXO39Q8N4B4 442 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 UCMAQ8WVF2 138 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 OR8D1Q8WZ84 308 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 RAB3IPQ96QF0 476 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-206ENST00000409754 CCDC28BQ9BUN5 200 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 TRMT61BQ9BVS5 477 aaKnown RBP13.91□□□□□ -0.18
LIMS2-206ENST00000409754 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 LATS2Q9NRM7 1088 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 GTSE1Q9NYZ3 720 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 KLHL42Q9P2K6 505 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 MUC22E2RYF6 1773 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-206ENST00000409754 ZDBF2Q9HCK1 2354 aa13.91□□□□□ -0.18
LIMS2-206ENST00000409754 TRPC5OSA6NMA1 111 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 DCXO43602 365 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 SLC25A14O95258 325 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 PDGFBP01127 241 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 ESRRAP11474 423 aaPredicted RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 DGKAP23743 735 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 GJA4P35212 333 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 MMP12P39900 470 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 RGS4P49798 205 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 ELAVL3Q14576 367 aaKnown RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 ZNF234Q14588 700 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 GPRC6AQ5T6X5 926 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 TXNDC11Q6PKC3 985 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 ACAD11Q709F0 780 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 PARS2Q7L3T8 475 aaKnown RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 RAVER1Q8IY67 606 aaKnown RBP13.9□□□□□ -0.18
LIMS2-206ENST00000409754 CLDN19Q8N6F1 224 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 LKAAEAR1Q8TD35 194 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 PANX3Q96QZ0 392 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 NUF2Q9BZD4 464 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 RASSF4Q9H2L5 321 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 TMEM245Q9H330 911 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 FAM83DQ9H4H8 585 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 TAGLN3Q9UI15 199 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 PPM1HQ9ULR3 514 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 CDYLQ9Y232 598 aa13.9□□□□□ -0.18
LIMS2-206ENST00000409754 TBC1D3BA6NDS4 549 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 PRR5-ARHGAP8B1AHC4 643 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 TNFRSF10AO00220 468 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 PSMD11O00231 422 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 TRIM16O95361 564 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 RPS17P08708 135 aaKnown RBP13.9□□□□□ -0.19
LIMS2-206ENST00000409754 ITGB7P26010 798 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 ARHGAP8P85298 464 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 B4GALNT1Q00973 533 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 SATB1Q01826 763 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 UBAP2LQ14157 1087 aaKnown RBP13.9□□□□□ -0.19
LIMS2-206ENST00000409754 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.19
LIMS2-206ENST00000409754 ADAMTSL2Q86TH1 951 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 GPSM1Q86YR5 675 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 TRAM1L1Q8N609 369 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 ZBTB2Q8N680 514 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 EDAQ92838 391 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 MAELQ96JY0 434 aaKnown RBP13.9□□□□□ -0.19
LIMS2-206ENST00000409754 OR52B2Q96RD2 323 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 SPATA16Q9BXB7 569 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.19
LIMS2-206ENST00000409754 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.19
LIMS2-206ENST00000409754 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms