RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MYO1GB0I1T2 1018 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 MYO1CO00159 1063 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 GRIA2P42262 883 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 GBP7Q8N8V2 638 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 ZCCHC10Q8TBK6 192 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 APOLD1Q96LR9 279 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 AARSD1Q9BTE6 412 aaKnown RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 DPY30Q9C005 99 aa11.28□□□□□ -0.6
SNX13-202ENST00000409604 COLQQ9Y215 455 aaPredicted RBP11.28□□□□□ -0.6
SNX13-202ENST00000409604 A0A087X1B8 175 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 LRRC14BA6NHZ5 514 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 OR4F21O95013 312 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 GBAP04062 536 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 DDX5P17844 614 aaKnown RBP11.27□□□□□ -0.6
SNX13-202ENST00000409604 IVDP26440 423 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 TNFRSF8P28908 595 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 BDKRB1P46663 353 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 COPAP53621 1224 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 ELAVL3Q14576 367 aaKnown RBP11.27□□□□□ -0.6
SNX13-202ENST00000409604 ZNF621Q6ZSS3 439 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 ERN2Q76MJ5 926 aaKnown RBP11.27□□□□□ -0.6
SNX13-202ENST00000409604 ADAMTSL2Q86TH1 951 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 LCN9Q8WX39 176 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 TMEM245Q9H330 911 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 GALPQ9UBC7 116 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.6
SNX13-202ENST00000409604 LAMP2P13473 410 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 SKIV2L2P42285 1042 aaKnown RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 NSG1P42857 185 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 PRIM2P49643 509 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 NEK2P51955 445 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 PLA2G16P53816 162 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 ZNF805Q5CZA5 627 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 PRRT3Q5FWE3 981 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 KIAA0930Q6ICG6 404 aaPredicted RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 BRAT1Q6PJG6 821 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 SPATS2Q86XZ4 545 aaKnown RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 SLC39A13Q96H72 371 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 ZNF599Q96NL3 588 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 IL17FQ96PD4 163 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 COPG2Q9UBF2 871 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 TBC1D30Q9Y2I9 924 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 C5orf58C9J3I9 102 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 H3BMM5 538 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 GSNP06396 782 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 DCNP07585 359 aaKnown RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 NTSR1P30989 418 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 PWP1Q13610 501 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 SNX20Q7Z614 316 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 ZC3HC1Q86WB0 502 aaKnown RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 DEFB107AQ8IZN7 70 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 GALNT4Q8N4A0 578 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 Q8N9G6 341 aaPredicted RBP11.27□□□□□ -0.61
SNX13-202ENST00000409604 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
SNX13-202ENST00000409604 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 KRT87PA6NCN2 255 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 SEC24DO94855 1032 aaPredicted RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 HOXC8P31273 242 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 IL12RB1P42701 662 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 PHEXP78562 749 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 CST6Q15828 149 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 TMEM198Q66K66 360 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 GPRIN3Q6ZVF9 776 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 ZNF781Q8N8C0 355 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 TMEM145Q8NBT3 493 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 OR4E2Q8NGC2 313 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 NXPE3Q969Y0 559 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 BCAP29Q9UHQ4 241 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 TSPAN6O43657 245 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 PLIN3O60664 434 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 STK16O75716 305 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 BPGMP07738 259 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 FASTKQ14296 549 aaKnown RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 INPP5AQ14642 412 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 CERS6Q6ZMG9 384 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 CUZD1Q86UP6 607 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 PNPT1Q8TCS8 783 aaKnown RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 TSGA13Q96PP4 275 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 EBPLQ9BY08 206 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 SPATS2LQ9NUQ6 558 aaKnown RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 TRIP11Q15643 1979 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 A0A0J9YYE9 177 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 MAGEC1O60732 1142 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 TRBC1P01850 177 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 PROCP04070 461 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 FBXW4P57775 412 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 SLC25A3Q00325 362 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 FOXM1Q08050 763 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 CYP4F3Q08477 520 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
SNX13-202ENST00000409604 SNCBQ16143 134 aa11.26□□□□□ -0.61
SNX13-202ENST00000409604 PIANPQ8IYJ0 282 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms