RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TCP1P17987 556 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 PSMA3P25788 255 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 VPS41P49754 854 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 CDKN1CP49918 316 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 PDX1P52945 283 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 TERF1P54274 439 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 DRG2P55039 364 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 INHBCP55103 352 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 SESN2P58004 480 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 CACNG1Q06432 222 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 GPS1Q13098 491 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 CYP1B1Q16678 543 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 TSTD2Q5T7W7 516 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 B3GNT8Q7Z7M8 397 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 PIM3Q86V86 326 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 ZNF761Q86XN6 746 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 PROSER1Q86XN7 944 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 NAT14Q8WUY8 206 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 HEXDCQ8WVB3 486 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 SH3KBP1Q96B97 665 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 TMEM74Q96NL1 305 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 POLR1BQ9H9Y6 1135 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 EPB41L5Q9HCM4 733 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 ZDHHC3Q9NYG2 299 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 SCHIP1Q9P0W5 487 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 CPNE7Q9UBL6 633 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 USP24Q9UPU5 2620 aa17.64■□□□□ 0.41
PDLIM2-206ENST00000409141 TRBV5-4A0A0C4DH59 114 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PRR19A6NJB7 356 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 AP3B1O00203 1094 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TAF4O00268 1085 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 CPNE6O95741 557 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PRSS56P0CW18 603 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 XRCC1P18887 633 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 CD1CP29017 333 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PBLDP30039 288 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 LSSP48449 732 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PPM1FP49593 454 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 ARSDP51689 593 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 GABREP78334 506 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 MAP9Q49MG5 647 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 C3orf38Q5JPI3 329 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 NKAIN2Q5VXU1 208 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 ABRAXAS1Q6UWZ7 409 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 MICALCLQ6ZW33 695 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 NLRP9Q7RTR0 991 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 SERPINA9Q86WD7 417 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 BEND7Q8N7W2 519 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 AVL9Q8NBF6 648 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PPHLN1Q8NEY8 458 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 STRADBQ9C0K7 418 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 RDH14Q9HBH5 336 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 SLC2A6Q9UGQ3 507 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 RIMKLBQ9ULI2 386 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 SATB2Q9UPW6 733 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 IGHV1OR21-1A0A087WYE8 117 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 CCDC187A0A096LP49 1063 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 BRINP1O60477 761 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PHF2O75151 1096 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 ATP1B2P14415 290 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TPSB2P20231 275 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 ACRV1P26436 265 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 NPY2RP49146 381 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 CDK16Q00536 496 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TPSAB1Q15661 275 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 PCID2Q5JVF3 399 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 AGAP9Q5VTM2 703 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 FOXR1Q6PIV2 292 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 WASH2PQ6VEQ5 465 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TMPRSS9Q7Z410 1059 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TRIM48Q8IWZ4 208 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 OR13J1Q8NGT2 312 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 WDR36Q8NI36 951 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 HDAC10Q969S8 669 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 CCDC97Q96F63 343 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 AHCYL2Q96HN2 611 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 NAPGQ99747 312 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 WASH6PQ9NQA3 447 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 BFARQ9NZS9 450 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 TCAF1Q9Y4C2 921 aa17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM2-206ENST00000409141 APC2O95996 2303 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 ACACAQ13085 2346 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 CCDC162PA2VCL2 907 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 MGAT4DA6NG13 374 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 OR51F1A6NGY5 319 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 VIPP01282 170 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 BRAFP15056 766 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 CCKBRP32239 447 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 SLC19A1P41440 591 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 HALP42357 657 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 UBE2IP63279 158 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 GPLD1P80108 840 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 DMPKQ09013 629 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 NFE2L1Q14494 772 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 CLPPQ16740 277 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 BCL7AQ4VC05 210 aa17.62■□□□□ 0.41
PDLIM2-206ENST00000409141 PAPD7Q5XG87 772 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms