RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CRTC3Q6UUV7 619 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 ARHGEF18Q6ZSZ5 1173 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 LINC00523Q86TU6 105 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 ZNF843Q8N446 348 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 TC2NQ8N9U0 490 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 RCBTB1Q8NDN9 531 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 SPATA22Q8NHS9 363 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 PATE1Q8WXA2 126 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 STAMBPL1Q96FJ0 436 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 SLC45A3Q96JT2 553 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 BBC3Q96PG8 261 aaPredicted RBP12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 CEP41Q9BYV8 373 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 OSBPL8Q9BZF1 889 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 TSGA10Q9BZW7 698 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 IMPACTQ9P2X3 320 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 AMFRQ9UKV5 643 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 OAS3Q9Y6K5 1087 aaKnown RBP12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 DMXL2Q8TDJ6 3036 aa12.65□□□□□ -0.38
SNORD88B-201ENST00000408454 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ERI2A8K979 691 aaKnown RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 AP3B1O00203 1094 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 IFRD1O00458 451 aaPredicted RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 RECKO95980 971 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 C9P02748 559 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 RBP3P10745 1247 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 HOXB3P14651 431 aaPredicted RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 VAV2P52735 878 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 EIF3EP60228 445 aaKnown RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 UBE2IP63279 158 aaKnown RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 PLOD1Q02809 727 aaPredicted RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 FOXM1Q08050 763 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 WASHC5Q12768 1159 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 NKAIN2Q5VXU1 208 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 NPNTQ6UXI9 565 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 PEX26Q7Z412 305 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 OOSP2Q86WS3 158 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ZFAND4Q86XD8 727 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 RASGRP3Q8IV61 690 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ZNF567Q8N184 647 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ZNF398Q8TD17 642 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 NKD1Q969G9 470 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 C9orf72Q96LT7 481 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 WDR24Q96S15 920 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 TSSK1BQ9BXA7 367 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ZNF768Q9H5H4 540 aaKnown RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 FOXJ2Q9P0K8 574 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 IL17CQ9P0M4 197 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 CRLS1Q9UJA2 301 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 DNAJC16Q9Y2G8 782 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ADGRG1Q9Y653 693 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ZFYVE26Q68DK2 2539 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 ASXL3Q9C0F0 2248 aa12.64□□□□□ -0.39
SNORD88B-201ENST00000408454 RP1P56715 2156 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 DSPP15924 2871 aaKnown RBP12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 TRBV23OR9-2A0A075B6M9 112 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 KCNN4O15554 427 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 PJA2O43164 708 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 PIRTP0C851 137 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 CCL4P13236 92 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 CSF2RBP32927 897 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 GSE1Q14687 1217 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 ATP13A5Q4VNC0 1218 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 KDELC1Q6UW63 502 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 FAM151BQ6UXP7 276 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 ZNF574Q6ZN55 896 aaPredicted RBP12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 RFLNAQ6ZTI6 216 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 HOOK3Q86VS8 718 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 PPP1R3BQ86XI6 285 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 SLC25A41Q8N5S1 370 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 RTP4Q96DX8 246 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 SPATA13Q96N96 652 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 COPS8Q99627 209 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 C17orf62Q9BQA9 187 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 ULBP3Q9BZM4 244 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 CAAP1Q9H8G2 361 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 LRRC40Q9H9A6 602 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 SLC40A1Q9NP59 571 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 IL26Q9NPH9 171 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 PRDM8Q9NQV8 689 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 PRKAB1Q9Y478 270 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 KCTD3Q9Y597 815 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 B3GALT1Q9Y5Z6 326 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 ZFHX4Q86UP3 3567 aa12.63□□□□□ -0.39
SNORD88B-201ENST00000408454 ZZEF1O43149 2961 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 C17orf113A0A1B0GUU1 675 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 UBA6A0AVT1 1052 aaPredicted RBP12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 MGAT4DA6NG13 374 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 A8MU76 341 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 C21orf140B9A014 251 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 KRT86O43790 486 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 SLC28A2O43868 658 aa12.62□□□□□ -0.39
SNORD88B-201ENST00000408454 KLHL41O60662 606 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms