RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 PRRG1O14668 218 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 HNRNPRO43390 633 aaKnown RBP16.64■□□□□ 0.25
NUP50-203ENST00000407019 BAIAP3O94812 1187 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 PGLSO95336 258 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 TFAP2AP05549 437 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 ALPIP09923 528 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 UFM1P61960 85 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 CREB5Q02930 508 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 ADAMTSL2Q86TH1 951 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 OR52B6Q8NGF0 335 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 VPS33AQ96AX1 596 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 EID2BQ96D98 161 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 SLC29A1Q99808 456 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 C1orf50Q9BV19 199 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 MUC13Q9H3R2 512 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 ZIM2Q9NZV7 527 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 SUN2Q9UH99 717 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 LEF1Q9UJU2 399 aaPredicted RBP16.64■□□□□ 0.25
NUP50-203ENST00000407019 COMMD3-BMI1R4GMX3 469 aa16.64■□□□□ 0.25
NUP50-203ENST00000407019 ARPC2O15144 300 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 S100BP04271 92 aaPredicted RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 PSMA4P25789 261 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 APLP1P51693 650 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 POLR2JP52435 117 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 ERVPABLB-1P60509 514 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 PCBP2Q15366 365 aaKnown RBP eCLIP16.63■□□□□ 0.256e-7■■■■■ 32.5
NUP50-203ENST00000407019 ATP6AP1LQ52LC2 224 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 PTRHD1Q6GMV3 140 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 ZBTB49Q6ZSB9 765 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 DNAJB7Q7Z6W7 309 aaPredicted RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 TMEM199Q8N511 208 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 DCBLD1Q8N8Z6 715 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 FNDC5Q8NAU1 212 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 WFDC5Q8TCV5 224 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 PIH1D2Q8WWB5 315 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 ALG14Q96F25 216 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 CDK15Q96Q40 435 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 TM6SF2Q9BZW4 377 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 CLPBQ9H078 707 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 TMEM45AQ9NWC5 275 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 PADI4Q9UM07 663 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 TNPO3Q9Y5L0 923 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 FAM234BA2RU67 622 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 SYNCRIPO60506 623 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 ZNF7P17097 686 aaPredicted RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 IL10P22301 178 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 ARL1P40616 181 aaPredicted RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 YBX1P67809 324 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 PRKCQQ04759 706 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 APOFQ13790 326 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 PAGE3Q5JUK9 113 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 C6orf136Q5SQH8 315 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 SPOUT1Q5T280 376 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 LETMD1Q6P1Q0 360 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 FAM151BQ6UXP7 276 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 TMEM150AQ86TG1 271 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 FAM110BQ8TC76 370 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 SLC22A12Q96S37 553 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 HIPK3Q9H422 1215 aa16.63■□□□□ 0.25
NUP50-203ENST00000407019 DNMT3BQ9UBC3 853 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 TSR3Q9UJK0 312 aaKnown RBP16.63■□□□□ 0.25
NUP50-203ENST00000407019 MYOCOSA0A1B0GUC4 107 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 K7ERQ8 282 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 HTRA2O43464 458 aaPredicted RBP16.62■□□□□ 0.25
NUP50-203ENST00000407019 OR6B1O95007 311 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 PRAMEF1O95521 474 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 ATP6V1B1P15313 513 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 CKMT2P17540 419 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 RPS3P23396 243 aaKnown RBP eCLIP16.62■□□□□ 0.25
NUP50-203ENST00000407019 GSK3BP49841 420 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 PPP4R4Q6NUP7 873 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 SBSNQ6UWP8 590 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 GOLGA7Q7Z5G4 137 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 SERPINA9Q86WD7 417 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 CARM1Q86X55 608 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 CAMK1DQ8IU85 385 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 MYO1HQ8N1T3 1032 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 DNAJB14Q8TBM8 379 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 GRIN3AQ8TCU5 1115 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 ADAMTS19Q8TE59 1207 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 DDI1Q8WTU0 396 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 KCTD14Q9BQ13 255 aaPredicted RBP16.62■□□□□ 0.25
NUP50-203ENST00000407019 TRIM8Q9BZR9 551 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 ALG2Q9H553 416 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 GNPTGQ9UJJ9 305 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 RNF11Q9Y3C5 154 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 TANC1Q9C0D5 1861 aa16.62■□□□□ 0.25
NUP50-203ENST00000407019 GFRA2O00451 464 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 RAD51BO15315 384 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 CAPN1P07384 714 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 NADK2Q4G0N4 442 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 TIGD2Q4W5G0 525 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 RABL3Q5HYI8 236 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 RETSATQ6NUM9 610 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 Q6ZNB5 142 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 Q6ZSR9 355 aa16.61■□□□□ 0.25
NUP50-203ENST00000407019 METTL25Q8N6Q8 603 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms