RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CYP2A6P11509 494 aaPredicted RBP24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 NSG1P42857 185 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 DGKGP49619 791 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 FOXA1P55317 472 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 ART3Q13508 389 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 SWT1Q5T5J6 900 aaKnown RBP24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 FAM109BQ6ICB4 259 aaPredicted RBP24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 RFLNAQ6ZTI6 216 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 FBXW8Q8N3Y1 598 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 KCNA7Q96RP8 456 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 AKTIPQ9H8T0 292 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 SPATS2LQ9NUQ6 558 aaKnown RBP24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 PKD2L2Q9NZM6 624 aa24.36■■□□□ 1.49
DNMT3A-206ENST00000406659 GIPC1O14908 333 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 ADH1CP00326 375 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 SPINT3P49223 89 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 FASTKQ14296 549 aaKnown RBP24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 ATP13A5Q4VNC0 1218 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 AGKQ53H12 422 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 ARSIQ5FYB1 569 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 TMC5Q6UXY8 1006 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 GK5Q6ZS86 529 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 WFIKKN2Q8TEU8 576 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 OSCP1Q8WVF1 389 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 COPS8Q99627 209 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 FAM126AQ9BYI3 521 aaPredicted RBP24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 STOML1Q9UBI4 398 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 EIF2B4Q9UI10 523 aaKnown RBP24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 PRPF19Q9UMS4 504 aaKnown RBP24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 C15orf41Q9Y2V0 281 aa24.35■■□□□ 1.49
DNMT3A-206ENST00000406659 RAD51BO15315 384 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 LEFTY1O75610 366 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ATP4BP51164 291 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ERVK-21P61565 698 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 TTLL9Q3SXZ7 439 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 GPRC6AQ5T6X5 926 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 EFL1Q7Z2Z2 1120 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ESAMQ96AP7 390 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 TNPO3Q9Y5L0 923 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 WASF2Q9Y6W5 498 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ESRRBO95718 433 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ASLP04424 464 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 SRPRAP08240 638 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 CISD3P0C7P0 127 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 ZNF30P17039 623 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 NFKBIAP25963 317 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 VIPR1P32241 457 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 VIPR2P41587 438 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 CCNG1P51959 295 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 STX1BP61266 288 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 TRIM68Q6AZZ1 485 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 SBSNQ6UWP8 590 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 SYVN1Q86TM6 617 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 MYLK4Q86YV6 388 aaPredicted RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 KIAA1958Q8N8K9 716 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 DTX3LQ8TDB6 740 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 SERPINI1Q99574 410 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 NUSAP1Q9BXS6 441 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 MRPL1Q9BYD6 325 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 STX18Q9P2W9 335 aaKnown RBP24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 IL36AQ9UHA7 158 aa24.34■■□□□ 1.49
DNMT3A-206ENST00000406659 VPS4BO75351 444 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 CHEK2O96017 543 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 SLC34A1Q06495 639 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 STX5Q13190 355 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 TCEAL5Q5H9L2 206 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 C9orf50Q5SZB4 431 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 EFCAB3Q8N7B9 438 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 RSPRY1Q96DX4 576 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 KCTD5Q9NXV2 234 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 BTRCQ9Y297 605 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 PTGDR2Q9Y5Y4 395 aa24.33■■□□□ 1.49
DNMT3A-206ENST00000406659 A0A1B0GTL3 188 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 E2F3O00716 465 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 HOXC11O43248 304 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 LINC00032P0C843 101 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 UROSP10746 265 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 ENO3P13929 434 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 PTDSS1P48651 473 aaKnown RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 VASPP50552 380 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 MTTPP55157 894 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 SESN3P58005 492 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 CDC16Q13042 620 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 PTK2BQ14289 1009 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 CRY1Q16526 586 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 BNC2Q6ZN30 1099 aaPredicted RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 GPRIN3Q6ZVF9 776 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 HPS6Q86YV9 775 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 CCDC124Q96CT7 223 aaKnown RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 SPATA16Q9BXB7 569 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 ABCG8Q9H221 673 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 TUBB1Q9H4B7 451 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 CERS4Q9HA82 394 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 FBRSL1Q9HCM7 1045 aaKnown RBP24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 PFDN4Q9NQP4 134 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 LATS2Q9NRM7 1088 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 OARD1Q9Y530 152 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 TIMM22Q9Y584 194 aa24.32■■□□□ 1.48
DNMT3A-206ENST00000406659 UPK3BL1B0FP48 263 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms