RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 SUCOQ9UBS9 1254 aaKnown RBP9.09□□□□□ -0.95
NUP43-204ENST00000403890 DNHD1Q96M86 4753 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 A0A0U1RQS6 177 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 A0A1W2PQJ5 194 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 C2CD4BA6NLJ0 364 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 KCNN4O15554 427 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 GRID2O43424 1007 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 F12P00748 615 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 IGHEP01854 428 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 PNMA6AP0CW24 399 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 CD99P14209 185 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 CLCNKAP51800 687 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 PTSQ03393 145 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 DCAF10Q5QP82 559 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 KMT5CQ86Y97 462 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 HSCBQ8IWL3 235 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 DSELQ8IZU8 1212 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 COG1Q8WTW3 980 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 CPT1BQ92523 772 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 MCCC1Q96RQ3 725 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 WDR77Q9BQA1 342 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 OSGEPL1Q9H4B0 414 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 SP110Q9HB58 689 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 ZBTB20Q9HC78 741 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 SLC40A1Q9NP59 571 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 KLC4Q9NSK0 619 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 DNAJC12Q9UKB3 198 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 AJAP1Q9UKB5 411 aaPredicted RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 CNOT6Q9ULM6 557 aaKnown RBP9.08□□□□□ -0.96
NUP43-204ENST00000403890 SIK3Q9Y2K2 1263 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 PPIL1Q9Y3C6 166 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 SPTBP11277 2137 aa9.08□□□□□ -0.96
NUP43-204ENST00000403890 MAP1AP78559 2803 aaPredicted RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 BICDL2A1A5D9 508 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 PEX12O00623 359 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 NUAK1O60285 661 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 JRKO75564 520 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 CAPN1P07384 714 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 DRD2P14416 443 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 CTPS1P17812 591 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 PON1P27169 355 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 OTX2P32243 289 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 PPP1R2P41236 205 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 TSFMP43897 325 aaKnown RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 STX17P56962 302 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 SOX8P57073 446 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 PPP1CAP62136 330 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 HSD11B2P80365 405 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 IL10RBQ08334 325 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 CDC16Q13042 620 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 GPR18Q14330 331 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 LBRQ14739 615 aaKnown RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 ARMC12Q5T9G4 340 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 TAF3Q5VWG9 929 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 NAA35Q5VZE5 725 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 FCRL6Q6DN72 434 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 SCYL2Q6P3W7 929 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 MTFR2Q6P444 385 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 RPTNQ6XPR3 784 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 CERS6Q6ZMG9 384 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 SPOCD1Q6ZMY3 1216 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 MRGPREQ86SM8 312 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 RBM12BQ8IXT5 1001 aaKnown RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 D2HGDHQ8N465 521 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 MEIOBQ8N635 442 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 JOSD2Q8TAC2 188 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 DNAJB14Q8TBM8 379 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 PPP4R1Q8TF05 950 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 SMARCE1Q969G3 411 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 CLIP3Q96DZ5 547 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 C14orf79Q96F83 325 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 SLX1AQ9BQ83 275 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 CARD9Q9H257 536 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 NOD2Q9HC29 1040 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 POT1Q9NUX5 634 aa9.07□□□□□ -0.96
NUP43-204ENST00000403890 NOVA2Q9UNW9 492 aaKnown RBP9.07□□□□□ -0.96
NUP43-204ENST00000403890 UBA6A0AVT1 1052 aaPredicted RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 PDZK1P1A8MUH7 402 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 PGLSO95336 258 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ZNF30P17039 623 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 HTR7P34969 479 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 RFC1P35251 1148 aaPredicted RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 RORAP35398 523 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 HADHAP40939 763 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ARCN1P48444 511 aaKnown RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 TPI1P60174 286 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 OTUD4Q01804 1114 aaKnown RBP9.06□□□□□ -0.96
NUP43-204ENST00000403890 SLC10A7Q0GE19 358 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 TRAF2Q12933 501 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 SSPNQ14714 243 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 NCF4Q15080 339 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 GPR19Q15760 415 aa9.06□□□□□ -0.96
NUP43-204ENST00000403890 ASIC2Q16515 512 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms