RNA–Protein interactions for RNA: ENST00000402383.3

VIM2P-201, Transcript of vimentin 2, pseudogene, humanhuman

BASIC

Gene VIM2P, Length 1,294 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM2P-201ENST00000402383 KRT81Q14533 505 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 PDK1Q15118 436 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 ATP13A4Q4VNC1 1196 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 BROXQ5VW32 411 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 LRRC66Q68CR7 880 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 WDR74Q6RFH5 385 aaPredicted RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 WASH2PQ6VEQ5 465 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SYT10Q6XYQ8 523 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 ZNF574Q6ZN55 896 aaPredicted RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 BZW1Q7L1Q6 419 aaKnown RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 TMC3Q7Z5M5 1100 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 TAF8Q7Z7C8 310 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 B3GNT8Q7Z7M8 397 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 TSPAN33Q86UF1 283 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 CCDC13Q8IYE1 715 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SFRP1Q8N474 314 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 FBXO39Q8N4B4 442 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 ZSCAN1Q8NBB4 408 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 OR4D9Q8NGE8 314 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SLC35G2Q8TBE7 412 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 RAPGEF5Q92565 580 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 AP2M1Q96CW1 435 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 LGMNQ99538 433 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 ADGRE3Q9BY15 652 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SPRY4Q9C004 299 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SLC25A51Q9H1U9 297 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 CARD9Q9H257 536 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 PCDH9Q9HC56 1237 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 CYP4F12Q9HCS2 524 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SARS2Q9NP81 518 aaKnown RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 NT5MQ9NPB1 228 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 MRPL40Q9NQ50 206 aaKnown RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 WASH6PQ9NQA3 447 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 ABHD10Q9NUJ1 306 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 RBM22Q9NW64 420 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 DDX56Q9NY93 547 aaKnown RBP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.54□□□□□ -1.36
VIM2P-201ENST00000402383 TAAR2Q9P1P5 351 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 CTTNBP2NLQ9P2B4 639 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 LRIT1Q9P2V4 623 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SUFUQ9UMX1 484 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 EFR3BQ9Y2G0 817 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 RNF215Q9Y6U7 377 aa6.54□□□□□ -1.36
VIM2P-201ENST00000402383 SPTBN1Q01082 2364 aaKnown RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 IGHV1OR21-1A0A087WYE8 117 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 LOC285095A0A1B0GVY8 99 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 B4E171 279 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TOX3O15405 576 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 MTSS1O43312 755 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 KIF5CO60282 957 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 NUAK1O60285 661 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 KCNJ13O60928 360 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PPFIA2O75334 1257 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 ZNF189O75820 626 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TNFSF15O95150 251 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PRKCGP05129 697 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 HLA-DQB2P05538 268 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 THRAP10827 490 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 LIPCP11150 499 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 NID1P14543 1247 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CASQ1P31415 396 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 SLC5A2P31639 672 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 HMGCLP35914 325 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TSPAN7P41732 249 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CDKN2BP42772 138 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 SNRPNP63162 240 aaKnown RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 COL9A2Q14055 689 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PRKD1Q15139 912 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TEX44Q53QW1 395 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 C3orf38Q5JPI3 329 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TMPRSS9Q7Z410 1059 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 ARHGAP22Q7Z5H3 698 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PIM3Q86V86 326 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 RHOT1Q8IXI2 618 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 KLHDC8BQ8IXV7 354 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CCDC170Q8IYT3 715 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CCL4L1Q8NHW4 92 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CPLX3Q8WVH0 158 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 EID2BQ96D98 161 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TEKT5Q96M29 485 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PLEKHG4BQ96PX9 1271 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 VPS35Q96QK1 796 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CCNL2Q96S94 520 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 VAT1Q99536 393 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CMKLR1Q99788 373 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 ZSCAN5AQ9BUG6 496 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 MLPHQ9BV36 600 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 DDA1Q9BW61 102 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 PACSIN1Q9BY11 444 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 DPEP2Q9H4A9 486 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TRABDQ9H4I3 376 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 NHEJ1Q9H9Q4 299 aaPredicted RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 CARS2Q9HA77 564 aaKnown RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 ZNHIT6Q9NWK9 470 aaKnown RBP6.53□□□□□ -1.36
VIM2P-201ENST00000402383 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 MRFAP1Q9Y605 127 aa6.53□□□□□ -1.36
VIM2P-201ENST00000402383 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms