RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 LMX1AQ8TE12 382 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PYROXD1Q8WU10 500 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LPGAT1Q92604 370 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SGF29Q96ES7 293 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TXLNGYQ9BZA5 131 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 P2RY12Q9H244 342 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 RMI1Q9H9A7 625 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LRRC4CQ9HCJ2 640 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TMEM9BQ9NQ34 198 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TRNAU1APQ9NX07 287 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NINJ2Q9NZG7 142 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BTBD3Q9Y2F9 522 aa12.24□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPR89AB7ZAQ6 455 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AQP9O43315 295 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FOXD2O60548 495 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PIAS1O75925 651 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 S1PR4O95977 384 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPR89BP0CG08 455 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ACP5P13686 325 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ATP1B2P14415 290 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MSH3P20585 1137 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GABRB3P28472 473 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRLHRP49683 370 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ATXN3P54252 364 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MPP1Q00013 466 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CTBSQ01459 385 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CTBP1Q13363 440 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ERCC6LQ2NKX8 1250 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BCL7AQ4VC05 210 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TEDDM1Q5T9Z0 273 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 STPG1Q5TH74 334 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TMEM220Q6QAJ8 160 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM83HQ6ZRV2 1179 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LRRTM4Q86VH4 590 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GALNT13Q8IUC8 556 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPR161Q8N6U8 529 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EIF1ADQ8N9N8 165 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM122AQ96E09 287 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BIRC8Q96P09 236 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SLC13A1Q9BZW2 595 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CDC42EP4Q9H3Q1 356 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 IARS2Q9NSE4 1012 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PCDHGB2Q9Y5G2 931 aa12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PTPRZ1P23471 2315 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TCRBV9S1A1TA0A576 114 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CXorf49A8MYA2 514 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 H3BM21 787 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TRIM38O00635 465 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 YKT6O15498 198 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EML2O95834 649 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF7P17097 686 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NSG1P42857 185 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TTPAP49638 278 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 BLKP51451 505 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LIMK1P53667 647 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KYNUQ16719 465 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 AARS2Q5JTZ9 985 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CTSL3PQ5NE16 218 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LYPLAL1Q5VWZ2 237 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF549Q6P9A3 640 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CCNI2Q6ZMN8 369 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CHST15Q7LFX5 561 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ALYREFQ86V81 257 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TRAPPC5Q8IUR0 188 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LILRA3Q8N6C8 439 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C2CD4AQ8NCU7 369 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LINC00615Q96LM1 132 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM167BQ9BTA0 163 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZCCHC2Q9C0B9 1178 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EPB41L4BQ9H329 900 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FBXO6Q9NRD1 293 aaPredicted RBP12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SPASTQ9UBP0 616 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNHIT2Q9UHR6 403 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FBXO5Q9UKT4 447 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPR34Q9UPC5 381 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KCNK6Q9Y257 313 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MED16Q9Y2X0 877 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PSAT1Q9Y617 370 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CSNK1G3Q9Y6M4 447 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CEP250Q9BV73 2442 aa12.22□□□□□ -0.45
HLA-DQB1-203ENST00000399082 COL5A1P20908 1838 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 A6NCN8 305 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 FAM159BA6NKW6 160 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 IQCF5A8MTL0 148 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CFAP99D6REC4 459 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LMO7DNF2Z398 122 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRMT5O14744 637 aaPredicted RBP12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TM4SF5O14894 197 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KMOO15229 486 aa12.21□□□□□ -0.45
HLA-DQB1-203ENST00000399082 YY2O15391 372 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms