RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 H0YC42 278 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 BOLA2-SMG1P6H3BVE0 249 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PSMD11O00231 422 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SDHDO14521 159 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 OR10H3O60404 316 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 NBNO60934 754 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PRKAR1AP10644 381 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 COL6A1P12109 1028 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PROZP22891 400 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PAX3P23760 479 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PBX3P40426 434 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 HCAR3P49019 387 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SMIM11AP58511 58 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SCN1BQ07699 218 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PLEKHG6Q3KR16 790 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PPP4R4Q6NUP7 873 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 RTL3Q8N8U3 475 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 LPPQ93052 612 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 MAGEB10Q96LZ2 347 aaPredicted RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 FBRSL1Q9HCM7 1045 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 NUDT4Q9NZJ9 180 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 ABT1Q9ULW3 272 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 VPS4AQ9UN37 437 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PCDHB1Q9Y5F3 818 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 MYBPHLA2RUH7 354 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 OGNP20774 298 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 GCAP28676 217 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 FEN1P39748 380 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 BRCC3P46736 316 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 HSPA7P48741 367 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 ALDH3A2P51648 485 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 RAB25P57735 213 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 INCA1Q0VD86 236 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 NPTX1Q15818 432 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 CERS6Q6ZMG9 384 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PIH1D2Q8WWB5 315 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 DHRS4Q9BTZ2 278 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 FAM105AQ9NUU6 356 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 CNOT11Q9UKZ1 510 aaKnown RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 ING4Q9UNL4 249 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 NUP188Q5SRE5 1749 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SGTAO43765 313 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 TMBIM6P55061 237 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 ARPC4P59998 168 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 RABL3Q5HYI8 236 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SDHAF4Q5VUM1 108 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 TMPRSS11AQ6ZMR5 421 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 BRSK1Q8TDC3 778 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 TMCO6Q96DC7 493 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 CDCA5Q96FF9 252 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 CGREF1Q99674 301 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 PDGFDQ9GZP0 370 aaPredicted RBP10.95□□□□□ -0.66
HPS4-202ENST00000398145 CLCA2Q9UQC9 943 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 SCN11AQ9UI33 1791 aa10.95□□□□□ -0.66
HPS4-202ENST00000398145 H0Y858 1186 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CYP11A1P05108 521 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CLTBP09497 229 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 AZGP1P25311 298 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 TIE1P35590 1138 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 RPL3P39023 403 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 SP2Q02086 613 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 MYBPC3Q14896 1274 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 RAB39AQ14964 217 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 TGFBIQ15582 683 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 ZNF423Q2M1K9 1284 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 XKR6Q5GH73 641 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 PIGGQ5H8A4 983 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 ANXA8L1Q5VT79 327 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CHST15Q7LFX5 561 aaPredicted RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 TRMT11Q7Z4G4 463 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 TXNDC5Q8NBS9 432 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 FLCNQ8NFG4 579 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 MAGEE1Q9HCI5 957 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 DIABLOQ9NR28 239 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 SOWAHBA6NEL2 793 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 C22orf31O95567 290 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 RPLP0P05388 317 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 WARSP23381 471 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 GRK4P32298 578 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 MAPK8P45983 427 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 TUFMP49411 452 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 UGT2B15P54855 530 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 IL18R1Q13478 541 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 SYT16Q17RD7 645 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 TREML2Q5T2D2 321 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 RBM20Q5T481 1227 aaKnown RBP10.94□□□□□ -0.66
HPS4-202ENST00000398145 LYPLAL1Q5VWZ2 237 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 FAM151BQ6UXP7 276 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 USP45Q70EL2 814 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CPNE9Q8IYJ1 553 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 CDK20Q8IZL9 346 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 GPR156Q8NFN8 814 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 C17orf50Q8WW18 174 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 PIK3R3Q92569 461 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 BIRC7Q96CA5 298 aa10.94□□□□□ -0.66
HPS4-202ENST00000398145 C1GALT1C1Q96EU7 318 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms