RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 SLC2A4P14672 509 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 ACTN2P35609 894 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 ARSDP51689 593 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 HHEXQ03014 270 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 GTF2H3Q13889 308 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 CYP1B1Q16678 543 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 KCTD19Q17RG1 926 aaPredicted RBP16.42■□□□□ 0.22
APTR-201ENST00000398043 GPR33Q49SQ1 333 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 C3orf38Q5JPI3 329 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 TMEM220Q6QAJ8 160 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 C4orf22Q6V702 233 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 FAM83HQ6ZRV2 1179 aaPredicted RBP16.42■□□□□ 0.22
APTR-201ENST00000398043 ZNF761Q86XN6 746 aaPredicted RBP16.42■□□□□ 0.22
APTR-201ENST00000398043 OR13J1Q8NGT2 312 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 WDR36Q8NI36 951 aaKnown RBP16.42■□□□□ 0.22
APTR-201ENST00000398043 NAT14Q8WUY8 206 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 SLC46A1Q96NT5 459 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 RANBP9Q96S59 729 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 SEMA6CQ9H3T2 930 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 OSGEPL1Q9H4B0 414 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 RDH14Q9HBH5 336 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 CPNE7Q9UBL6 633 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 RIMKLBQ9ULI2 386 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 DNAJC16Q9Y2G8 782 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 WDR37Q9Y2I8 494 aa16.42■□□□□ 0.22
APTR-201ENST00000398043 ZFHX4Q86UP3 3567 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 A0A087WV48 116 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 OR2AG2A6NM03 316 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 CDRT15L2A8MXV6 281 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 TMX2-CTNND1H3BSU7 103 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 POP7O75817 140 aaKnown RBP16.41■□□□□ 0.22
APTR-201ENST00000398043 APRTP07741 180 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 PRSS56P0CW18 603 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 HOXB3P14651 431 aaPredicted RBP16.41■□□□□ 0.22
APTR-201ENST00000398043 ITGALP20701 1170 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 MC4RP32245 332 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 SLC19A1P41440 591 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 GPLD1P80108 840 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 ACVR1Q04771 509 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 AMZ1Q400G9 498 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 ZNF658BQ4V348 819 aaPredicted RBP16.41■□□□□ 0.22
APTR-201ENST00000398043 BCL7AQ4VC05 210 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 CCDC38Q502W7 563 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 NKAIN2Q5VXU1 208 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 USP53Q70EK8 1073 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 SLC9B2Q86UD5 537 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 PIM3Q86V86 326 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 AMZ2Q86W34 360 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 PIANPQ8IYJ0 282 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 LSMEM2Q8N112 164 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 ULK4Q96C45 1275 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 SGF29Q96ES7 293 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 ZNF514Q96K75 400 aaPredicted RBP16.41■□□□□ 0.22
APTR-201ENST00000398043 LINC00615Q96LM1 132 aaPredicted RBP16.41■□□□□ 0.22
APTR-201ENST00000398043 OSBPL9Q96SU4 736 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 FAM96AQ9H5X1 160 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 UCK1Q9HA47 277 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 KCNK4Q9NYG8 393 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 SMARCAL1Q9NZC9 954 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 PDP2Q9P2J9 529 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 CHD6Q8TD26 2715 aa16.41■□□□□ 0.22
APTR-201ENST00000398043 LAMA5O15230 3695 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 IGHV5-10-1A0A0J9YXX1 117 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 CES2O00748 559 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 MSH3P20585 1137 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 IDSP22304 550 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ACRV1P26436 265 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 RPL10P27635 214 aaKnown RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 EIF2S3P41091 472 aaKnown RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 MLLT3P42568 568 aaPredicted RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 LIMK2P53671 638 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 EPHA4P54764 986 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ERVPABLB-1P60509 514 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 EIF3IQ13347 325 aaKnown RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 SEPT6Q14141 434 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 CLCA4Q14CN2 919 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 METRNLQ641Q3 311 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ZNF534Q76KX8 674 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 BEND7Q8N7W2 519 aaPredicted RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 ACTRT1Q8TDG2 376 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 FGF11Q92914 225 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ZNF778Q96MU6 729 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ZNF578Q96N58 590 aaPredicted RBP16.4■□□□□ 0.22
APTR-201ENST00000398043 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 ZDHHC3Q9NYG2 299 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 TMEM9Q9P0T7 183 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 CRLS1Q9UJA2 301 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 PYCARDQ9ULZ3 195 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 SNX12Q9UMY4 172 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 SLC30A1Q9Y6M5 507 aa16.4■□□□□ 0.22
APTR-201ENST00000398043 SNRNP200O75643 2136 aaKnown RBP16.39■□□□□ 0.21
APTR-201ENST00000398043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.39■□□□□ 0.21
APTR-201ENST00000398043 PRAMEF33A0A0G2JMD5 474 aa16.39■□□□□ 0.21
APTR-201ENST00000398043 HEATR9A2RTY3 570 aa16.39■□□□□ 0.21
APTR-201ENST00000398043 MGAT4DA6NG13 374 aa16.39■□□□□ 0.21
APTR-201ENST00000398043 LILRA5A6NI73 299 aa16.39■□□□□ 0.21
APTR-201ENST00000398043 E7EVH7 732 aa16.39■□□□□ 0.21
APTR-201ENST00000398043 PLD2O14939 933 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms