RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 BTLAQ7Z6A9 289 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SETD9Q8NE22 299 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 THRSPQ92748 146 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 STMN2Q93045 179 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 CCNL2Q96S94 520 aaPredicted RBP6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 R3HDMLQ9H3Y0 253 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DCLRE1BQ9H816 532 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 RNF186Q9NXI6 227 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 ANKFY1Q9P2R3 1169 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 COPG2Q9UBF2 871 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 PLCL2Q9UPR0 1127 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 SHOC2Q9UQ13 582 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 NPFFR2Q9Y5X5 522 aa6.54□□□□□ -1.36
TM9SF4-202ENST00000398022 DOCK1Q14185 1865 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 EDF1O60869 148 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 DNAJB6O75190 326 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 VPS4BO75351 444 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MBP02144 154 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 KRT8P05787 483 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HBQ1P09105 142 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CCDC130P13994 396 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CD58P19256 250 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NFKB1P19838 968 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CHMP24386 653 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MAOBP27338 520 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PTPN4P29074 926 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FOXN2P32314 431 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CD79BP40259 229 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 KIR3DL2P43630 455 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 LIG4P49917 911 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 P2RY4P51582 365 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 WDR4P57081 412 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ANGPT1Q15389 498 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 LTB4RQ15722 352 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC10A6Q3KNW5 377 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ANKS1BQ7Z6G8 1248 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 KIF18BQ86Y91 864 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ADCY4Q8NFM4 1077 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CMASQ8NFW8 434 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 RDM1Q8NG50 284 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ACER1Q8TDN7 264 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SETD7Q8WTS6 366 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HSPBAP1Q96EW2 488 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TAS2R10Q9NYW0 307 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 WARS2Q9UGM6 360 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MROH7Q68CQ1 1323 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 GPRIN2O60269 458 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CCDC22O60826 627 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MTX2O75431 263 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 GAAP10253 952 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PKMP14618 531 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ITGB5P18084 799 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NCF2P19878 526 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CXCR2P25025 360 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PIK3CGP48736 1102 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ARL4CP56559 192 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 STX1BP61266 288 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 C1QBPQ07021 282 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PDIA2Q13087 525 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 KPNB1Q14974 876 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SURF1Q15526 300 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SSX2Q16385 188 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HIF1AQ16665 826 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TEX30Q5JUR7 227 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TIGD7Q6NT04 549 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ATG14Q6ZNE5 492 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NLRX1Q86UT6 975 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NUDT13Q86X67 352 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 C4orf33Q8N1A6 199 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ZNF781Q8N8C0 355 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 LEMD2Q8NC56 503 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TMEM161BQ8NDZ6 487 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HEXIM2Q96MH2 286 aaKnown RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 C12orf57Q99622 126 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 OR51B6Q9H340 312 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 PRO3102Q9H379 93 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 GPRC5CQ9NQ84 441 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 C19orf12Q9NSK7 152 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC13A4Q9UKG4 626 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 USP18Q9UMW8 372 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MYO15AQ9UKN7 3530 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 A0A1W2PN81 502 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 MFSD2BA6NFX1 497 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 C2CD2LO14523 706 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 AQP9O43315 295 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 HAUS5O94927 633 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 IGHA2P01877 340 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 LTFP02788 710 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ICAM1P05362 532 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SRCP12931 536 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 NCF1P14598 390 aaPredicted RBP6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 CHRNA7P36544 502 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 TALDO1P37837 337 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 SLC11A1P49279 550 aa6.53□□□□□ -1.36
TM9SF4-202ENST00000398022 ATP6V0D1P61421 351 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms