RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 GNA12Q03113 381 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 PLEKHG4Q58EX7 1191 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ATAD3BQ5T9A4 648 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 FBXL19Q6PCT2 694 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 C11orf88Q6PI97 169 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 KLHDC10Q6PID8 442 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 UBE2R2Q712K3 238 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ANKRD23Q86SG2 305 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 TMEM110Q86TL2 294 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 RBFAQ8N0V3 343 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 CACTIN-AS1Q8N1I8 211 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 OR10Q1Q8NGQ4 319 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 CD99L2Q8TCZ2 262 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 TMEM174Q8WUU8 243 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 NELL1Q92832 810 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SNX27Q96L92 541 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 UBAP1Q9NZ09 502 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 GIT1Q9Y2X7 761 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SQORQ9Y6N5 450 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SMIM35A0A1B0GVV1 85 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 DYTNA2CJ06 578 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 IDH3BO43837 385 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 STK16O75716 305 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 AOC1P19801 751 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 CASP9P55211 416 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 PAQR3Q6TCH7 311 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 MACC1Q6ZN28 852 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 PIM3Q86V86 326 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 MYDGFQ969H8 173 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 CHCHD6Q9BRQ6 235 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 TRIM8Q9BZR9 551 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ABCB9Q9NP78 766 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 RBBP6Q7Z6E9 1792 aaKnown RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 GPIP06744 558 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 HPGDP15428 266 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 FUT4P22083 530 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 MAGEA10P43363 369 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SNRPD1P62314 119 aaKnown RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 MAP2K5Q13163 448 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 USP39Q53GS9 565 aaKnown RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ARMC6Q6NXE6 501 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 DEF8Q6ZN54 512 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SPATA19Q7Z5L4 167 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 SIDT2Q8NBJ9 832 aaKnown RBP10.66□□□□□ -0.7
CCDC40-204ENST00000397545 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 HSPBAP1Q96EW2 488 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 AP3M1Q9Y2T2 418 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 ARL5AQ9Y689 179 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 KCNE2Q9Y6J6 123 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 LTBP3Q9NS15 1303 aa10.66□□□□□ -0.7
CCDC40-204ENST00000397545 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CCDC162PA2VCL2 907 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 LINGO3P0C6S8 592 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 NR2F1P10589 423 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 RHOQP17081 205 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SLC6A2P23975 617 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CAPZA2P47755 286 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 DGKQP52824 942 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PITX1P78337 314 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 HMGCS1Q01581 520 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 HNRNPDQ14103 355 aaKnown RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PCLAFQ15004 111 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 TCEAL1Q15170 157 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CLEC20AQ6ZU45 233 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CHST15Q7LFX5 561 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ITIH5Q86UX2 942 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 UBE2J2Q8N2K1 259 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 COX4I2Q96KJ9 171 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 DEFB118Q96PH6 123 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 AKTIPQ9H8T0 292 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ZFYVE1Q9HBF4 777 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 EURLQ9NYK6 297 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SPG21Q9NZD8 308 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 GALPQ9UBC7 116 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ENOPH1Q9UHY7 261 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CENPXA8MT69 81 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ENPP3O14638 875 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ALDH1A2O94788 518 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 PIGRP01833 764 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SLC7A1P30825 629 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 GSTM5P46439 218 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SLC10A7Q0GE19 358 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 MERTKQ12866 999 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 INTS6LQ5JSJ4 861 aaKnown RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 MBLAC2Q68D91 279 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 ZC3HC1Q86WB0 502 aaKnown RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 OOSP2Q86WS3 158 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 GPR65Q8IYL9 337 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 CDK20Q8IZL9 346 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 SKA1Q96BD8 255 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 AARSD1Q9BTE6 412 aaKnown RBP10.65□□□□□ -0.7
CCDC40-204ENST00000397545 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
CCDC40-204ENST00000397545 GSTK1Q9Y2Q3 226 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms