RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 LLGL1Q15334 1064 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 ANO6Q4KMQ2 910 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 HENMT1Q5T8I9 393 aaKnown RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 CACHD1Q5VU97 1274 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 CUZD1Q86UP6 607 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 BPHLQ86WA6 291 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 ADAMTS17Q8TE56 1095 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 NSMCE1Q8WV22 266 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 CHTF18Q8WVB6 975 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SGSM3Q96HU1 749 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SMIM14Q96QK8 99 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 WDR24Q96S15 920 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 LYSMD1Q96S90 227 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 RAB33BQ9H082 229 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 ZWILCHQ9H900 591 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 PDE7BQ9NP56 450 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 FAM207AQ9NSI2 230 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SAMSN1Q9NSI8 373 aaKnown RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SUCOQ9UBS9 1254 aaKnown RBP9.25□□□□□ -0.93
NEDD9-203ENST00000397378 PCSK1NQ9UHG2 260 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 SNX7Q9UNH6 387 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 NEU2Q9Y3R4 380 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
NEDD9-203ENST00000397378 FADS2P1A8MWK0 482 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 GPR89AB7ZAQ6 455 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 KIF1CO43896 1103 aaKnown RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 PRPSAP2O60256 369 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 GPR89BP0CG08 455 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ATP1A3P13637 1013 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 MIPP30301 263 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 SPINT3P49223 89 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 VAV2P52735 878 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 EPHB1P54762 984 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TLE4Q04727 773 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 MAMLD1Q13495 774 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 DPCR1Q3MIW9 517 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ALG1LQ6GMV1 187 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 PLEKHA7Q6IQ23 1121 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ACAD10Q6JQN1 1059 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 PWWP2BQ6NUJ5 590 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 PPP1R2P3Q6NXS1 205 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TMCO3Q6UWJ1 677 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 RBM12BQ8IXT5 1001 aaKnown RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ZADH2Q8N4Q0 377 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ZNF808Q8N4W9 903 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ATPAF2Q8N5M1 289 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TEX26Q8N6G2 289 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 GRHL3Q8TE85 626 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TM9SF4Q92544 642 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 RSC1A1Q92681 617 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 MR1Q95460 341 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ZDHHC12Q96GR4 267 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TRAPPC9Q96Q05 1148 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 AGPAT1Q99943 283 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 GSX1Q9H4S2 264 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 POT1Q9NUX5 634 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 SEPT11Q9NVA2 429 aaKnown RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 PARVAQ9NVD7 372 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 TAB2Q9NYJ8 693 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ZNF624Q9P2J8 865 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-203ENST00000397378 ATXN10Q9UBB4 475 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 RARRES3Q9UL19 164 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 SIK3Q9Y2K2 1263 aa9.24□□□□□ -0.93
NEDD9-203ENST00000397378 DOCK10Q96BY6 2186 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 PCM1Q15154 2024 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 RGSL1A5PLK6 1076 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 H3BRJ5 948 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CHUKO15111 745 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CLDN7O95471 211 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 ZNF8P17098 575 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 FECHP22830 423 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CES1P23141 567 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 SERPINB6P35237 376 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 ARL4AP40617 200 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 RPL26P61254 145 aaKnown RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 PPP2R2AP63151 447 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 TUBB3Q13509 450 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 DPYSL2Q16555 572 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CT47A1Q5JQC4 288 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 FAM69BQ5VUD6 431 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 ABRAXAS1Q6UWZ7 409 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 WASH2PQ6VEQ5 465 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 Q6ZS92 163 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 LRRC49Q8IUZ0 686 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CEP97Q8IW35 865 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 TRIM48Q8IWZ4 208 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 SIDT2Q8NBJ9 832 aaKnown RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 UBXN4Q92575 508 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 C14orf79Q96F83 325 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 CCDC120Q96HB5 630 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 SLC41A2Q96JW4 573 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 MDFIQ99750 246 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 POLR1EQ9GZS1 481 aaKnown RBP9.23□□□□□ -0.93
NEDD9-203ENST00000397378 OSGEPL1Q9H4B0 414 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 FAM83DQ9H4H8 585 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 SLC40A1Q9NP59 571 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 NT5MQ9NPB1 228 aa9.23□□□□□ -0.93
NEDD9-203ENST00000397378 WASH6PQ9NQA3 447 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms