RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CREG1O75629 220 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 RFPL1O75677 317 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 SLC25A14O95258 325 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 FGF5P12034 268 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 SKILP12757 684 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF28P17035 718 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF8P17098 575 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 AMD1P17707 334 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 MX2P20592 715 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ARSEP51690 589 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 SLC25A11Q02978 314 aaKnown RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 NIPAL4Q0D2K0 466 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ERV3-1Q14264 604 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 PDK2Q15119 407 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 RNFT1Q5M7Z0 435 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ATP1A1-AS1Q5TC04 95 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 PDPK2PQ6A1A2 396 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 CYB5D1Q6P9G0 228 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ABRAXAS1Q6UWZ7 409 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 WASH2PQ6VEQ5 465 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 RASGRP3Q8IV61 690 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 APLFQ8IW19 511 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 MAP7D3Q8IWC1 876 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 TRIM48Q8IWZ4 208 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 KCTD6Q8NC69 237 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 LPCAT1Q8NF37 534 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 KLHL6Q8WZ60 621 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 SEC14L1Q92503 715 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 STAMBPL1Q96FJ0 436 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZDHHC12Q96GR4 267 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 TGM7Q96PF1 710 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 OR6C1Q96RD1 312 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZSCAN5AQ9BUG6 496 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 XPO4Q9C0E2 1151 aaKnown RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 RAB33BQ9H082 229 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 NAT10Q9H0A0 1025 aaKnown RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 OR2AG1Q9H205 316 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF768Q9H5H4 540 aaKnown RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZFYVE1Q9HBF4 777 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 WASH6PQ9NQA3 447 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 OGFRQ9NZT2 677 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF624Q9P2J8 865 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 TLK1Q9UKI8 766 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 MRPS18BQ9Y676 258 aaKnown RBP8.62□□□□□ -1.03
CAPN3-208ENST00000397204 SLC30A1Q9Y6M5 507 aa8.62□□□□□ -1.03
CAPN3-208ENST00000397204 C21orf140B9A014 251 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 K7EM74 188 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 KMOO15229 486 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 VEGFDO43915 354 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 KCNJ13O60928 360 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 VPS4BO75351 444 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 RASSF9O75901 435 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 MTA2O94776 668 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 KIAA0754O94854 1291 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 NDUFA10O95299 355 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 JCHAINP01591 159 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 FURINP09958 794 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF7P17097 686 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-208ENST00000397204 TYRP1P17643 537 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SEPHS1P49903 392 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 MLLT10P55197 1068 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 GFERP55789 205 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 DBN1Q16643 649 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 AGAP9Q5VTM2 703 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 CACHD1Q5VU97 1274 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 NCBP2-AS2Q69YL0 99 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 PRSS42Q7Z5A4 293 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 ADGRG6Q86SQ4 1221 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 PPP1R3BQ86XI6 285 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAPN3-208ENST00000397204 GALNT11Q8NCW6 608 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 GLYATL1Q969I3 302 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 ZNF837Q96EG3 531 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SPATA16Q9BXB7 569 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 GPR87Q9BY21 358 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 TWSG1Q9GZX9 223 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 OSGEPL1Q9H4B0 414 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 MAGEE1Q9HCI5 957 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 PDE7BQ9NP56 450 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SLC40A1Q9NP59 571 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SCHIP1Q9P0W5 487 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SEMA5BQ9P283 1151 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 NFKBIL1Q9UBC1 381 aaPredicted RBP8.61□□□□□ -1.03
CAPN3-208ENST00000397204 SLC23A2Q9UGH3 650 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 VPS4AQ9UN37 437 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 TTLL3Q9Y4R7 772 aa8.61□□□□□ -1.03
CAPN3-208ENST00000397204 CELSR2Q9HCU4 2923 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 BLACEA4D250 179 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 SMTNL1A8MU46 457 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 PDZK1P1A8MUH7 402 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 MFSD11O43934 449 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 CDK14O94921 469 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 CYP1A2P05177 515 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 MMP2P08253 660 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 KRT7P08729 469 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 CD48P09326 243 aa8.6□□□□□ -1.03
CAPN3-208ENST00000397204 VCLP18206 1134 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms