RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 BPIFB4P59827 614 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 HSD11B2P80365 405 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 ABRQ12979 859 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 GPR19Q15760 415 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 WASH2PQ6VEQ5 465 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 PAF1Q8N7H5 531 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 COG1Q8WTW3 980 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 IP6K3Q96PC2 410 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 TREX2Q9BQ50 279 aaPredicted RBP13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 TRIM56Q9BRZ2 755 aaKnown RBP13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 DNAJC12Q9UKB3 198 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 ABCA4P78363 2273 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
VCPKMT-201ENST00000395859 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 CHUKO15111 745 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 JRKO75564 520 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 PDHA1P08559 390 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF30P17039 623 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF8P17098 575 aaPredicted RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 CTPS1P17812 591 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 HADHAP40939 763 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 AIF1P55008 147 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 GSCP56915 257 aaPredicted RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 KCNK10P57789 538 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 PTP4A2Q12974 167 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 LBRQ14739 615 aaKnown RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 CDSNQ15517 529 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 HIF1AQ16665 826 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 HENMT1Q5T8I9 393 aaKnown RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 AGAP9Q5VTM2 703 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 FCRL6Q6DN72 434 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 RPTNQ6XPR3 784 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 GBP6Q6ZN66 633 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 USP45Q70EL2 814 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 NOP9Q86U38 636 aaKnown RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 SYTL1Q8IYJ3 562 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 NPWQ8N729 165 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 CPT1BQ92523 772 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 FAM207AQ9NSI2 230 aaPredicted RBP13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 LMBRD1Q9NUN5 540 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 ATXN10Q9UBB4 475 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 BTRCQ9Y297 605 aa13.37□□□□□ -0.27
VCPKMT-201ENST00000395859 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 A0A0J9YYE9 177 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 TLCD2A6NGC4 264 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 OR52A4PA6NMU1 304 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 TRBC1P01850 177 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 AGAP20933 346 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 UBE2HP62256 183 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF169Q14929 603 aaPredicted RBP13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 PLA2G4EQ3MJ16 856 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 TAF3Q5VWG9 929 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 NAA35Q5VZE5 725 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 RPUSD3Q6P087 351 aaKnown RBP13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 TRIM48Q8IWZ4 208 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 FMR1NBQ8N0W7 255 aaPredicted RBP13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 CLEC1AQ8NC01 280 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 MSANTD4Q8NCY6 345 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 NELFBQ8WX92 580 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 ZNF599Q96NL3 588 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 CD180Q99467 661 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 CXXC4Q9H2H0 198 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 SP110Q9HB58 689 aa13.36□□□□□ -0.27
VCPKMT-201ENST00000395859 CYP1A1P04798 512 aaPredicted RBP13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 MMEP08473 750 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 DRD2P14416 443 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 FECHP22830 423 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 OTX2P32243 289 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 HSPA9P38646 679 aaKnown RBP13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 ART1P52961 327 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 TPI1P60174 286 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 TLE4Q04727 773 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 STIM1Q13586 685 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 IHHQ14623 411 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 SSPNQ14714 243 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 RALGPS1Q5JS13 557 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 TRIM72Q6ZMU5 477 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 DHRS4Q9BTZ2 278 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 PDCL3Q9H2J4 239 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 DLL4Q9NR61 685 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 OLAHQ9NV23 265 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 P4HTMQ9NXG6 502 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 SUCOQ9UBS9 1254 aaKnown RBP13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 NEU2Q9Y3R4 380 aa13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 FN1P02751 2386 aaKnown RBP13.35□□□□□ -0.27
VCPKMT-201ENST00000395859 TCRBV5S1A1TA0A578 114 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 CCDC78A2IDD5 438 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 GPR89AB7ZAQ6 455 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 CCP110O43303 1012 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 LCA5LO95447 670 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 IGHEP01854 428 aa13.34□□□□□ -0.27
VCPKMT-201ENST00000395859 MSL3P1P0C860 447 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms