RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 BPIP17213 487 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 KRT4P19013 534 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 OGNP20774 298 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 VIPR1P32241 457 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 MAGEA12P43365 314 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 SPINT3P49223 89 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 STC1P52823 247 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 MPP1Q00013 466 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 RALGDSQ12967 914 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 HSF5Q4G112 596 aaPredicted RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 C2orf27AQ580R0 203 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 ZDHHC20Q5W0Z9 365 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 SDE2Q6IQ49 451 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 MICALCLQ6ZW33 695 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 SDCCAG8Q86SQ7 713 aaPredicted RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 MMAAQ8IVH4 418 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 ARMC10Q8N2F6 343 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 ARFGAP2Q8N6H7 521 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 BANPQ8N9N5 519 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 ACMSDQ8TDX5 336 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 ARRDC3Q96B67 414 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 PPP1R16AQ96I34 528 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 VPS39Q96JC1 886 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 GPR22Q99680 433 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 SEMA6CQ9H3T2 930 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 CATSPERZQ9NTU4 200 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 APPL1Q9UKG1 709 aa11.32□□□□□ -0.6
RTN1-203ENST00000395090 MTO1Q9Y2Z2 717 aaKnown RBP11.32□□□□□ -0.6
RTN1-203ENST00000395090 TRBV5-4A0A0C4DH59 114 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 A0A1W2PQF6 199 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 A8MX80 341 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CHURC1-FNTBB4DL54 471 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 C1QTNF3-AMACRE9PGA6 284 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 H0Y858 1186 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 SMAD7O15105 426 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTN1-203ENST00000395090 TYROBPO43914 113 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 IL1BP01584 269 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 BRAFP15056 766 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 MC4RP32245 332 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 HPDP32754 393 aaPredicted RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 MMP12P39900 470 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 WASP42768 502 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 METAP1P53582 386 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 SATB1Q01826 763 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CREB5Q02930 508 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ZP2Q05996 745 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 BMPR2Q13873 1038 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 SEMA3AQ14563 771 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 FASTKD1Q53R41 847 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 ZNF789Q5FWF6 425 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 NLRC3Q7RTR2 1065 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 DCLK2Q8N568 766 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 RAB7BQ96AH8 199 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 PLEKHG4BQ96PX9 1271 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 SMC6Q96SB8 1091 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CNOT10Q9H9A5 744 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 INTS10Q9NVR2 710 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 CKAP5Q14008 2032 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 PSMD11O00231 422 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 C1SP09871 688 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ADRB3P13945 408 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 C5AR1P21730 350 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 XPAP23025 273 aaPredicted RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 CCNFP41002 786 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CD151P48509 253 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 COPAP53621 1224 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 GYS2P54840 703 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ADARP55265 1226 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 SEMG2Q02383 582 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CACNG1Q06432 222 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ARHGEF7Q14155 803 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 SLBPQ14493 270 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTN1-203ENST00000395090 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 GPR33Q49SQ1 333 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 LRRC73Q5JTD7 316 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CDCP2Q5VXM1 449 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 KIAA1211LQ6NV74 962 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CNSTQ6PJW8 725 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 LIPIQ6XZB0 460 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CERS6Q6ZMG9 384 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ERN2Q76MJ5 926 aaKnown RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 TECPR1Q7Z6L1 1165 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 PIANPQ8IYJ0 282 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 GPR26Q8NDV2 337 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 ACVR1CQ8NER5 493 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 OR2T3Q8NH03 318 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 DENND1AQ8TEH3 1009 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 FAM131CQ96AQ9 280 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CDH19Q9H159 772 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 NFKBIL1Q9UBC1 381 aaPredicted RBP11.31□□□□□ -0.6
RTN1-203ENST00000395090 ADAM21Q9UKJ8 722 aa11.31□□□□□ -0.6
RTN1-203ENST00000395090 CORO1CQ9ULV4 474 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms