RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CCHCR1Q8TD31 782 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 TEKT4Q8WW24 435 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 UBXN4Q92575 508 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 GLYATL1Q969I3 302 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 CXorf40BQ96DE9 158 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 ZNF514Q96K75 400 aaPredicted RBP15.52■□□□□ 0.08
SNCA-205ENST00000394991 MLPHQ9BV36 600 aaPredicted RBP15.52■□□□□ 0.08
SNCA-205ENST00000394991 SLAMF7Q9NQ25 335 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 FGF21Q9NSA1 209 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 MAP10Q9P2G4 905 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 MYO1AQ9UBC5 1043 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 TRIM10Q9UDY6 481 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 WDR37Q9Y2I8 494 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 PCDHGB7Q9Y5F8 929 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 SCINQ9Y6U3 715 aa15.52■□□□□ 0.08
SNCA-205ENST00000394991 ANKRD66B4E2M5 251 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 GPR89AB7ZAQ6 455 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNCA-205ENST00000394991 DPM1O60762 260 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 GPR89BP0CG08 455 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 LPOP22079 712 aaPredicted RBP15.51■□□□□ 0.07
SNCA-205ENST00000394991 CES1P23141 567 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 ZNF165P49910 485 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 GALNT3Q14435 633 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 NR6A1Q15406 480 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 AGAP9Q5VTM2 703 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 FAM69BQ5VUD6 431 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 C1QL3Q5VWW1 255 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 E4F1Q66K89 784 aaPredicted RBP15.51■□□□□ 0.07
SNCA-205ENST00000394991 NCBP2-AS2Q69YL0 99 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 WASH2PQ6VEQ5 465 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 ZNF517Q6ZMY9 492 aaPredicted RBP15.51■□□□□ 0.07
SNCA-205ENST00000394991 ZNF571Q7Z3V5 609 aaPredicted RBP15.51■□□□□ 0.07
SNCA-205ENST00000394991 C11orf96Q7Z7L8 435 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 RBM12BQ8IXT5 1001 aaKnown RBP15.51■□□□□ 0.07
SNCA-205ENST00000394991 PNPLA2Q96AD5 504 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 MAP3K3Q99759 626 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 NUP85Q9BW27 656 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 WASH6PQ9NQA3 447 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 AMACRQ9UHK6 382 aa15.51■□□□□ 0.07
SNCA-205ENST00000394991 CPNE3O75131 537 aaKnown RBP15.5■□□□□ 0.07
SNCA-205ENST00000394991 JCHAINP01591 159 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 PIRTP0C851 137 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 GZMAP12544 262 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 DCDC1P59894 354 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 ACY1Q03154 408 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 PAFAH1B3Q15102 231 aaKnown RBP15.5■□□□□ 0.07
SNCA-205ENST00000394991 FAM182AQ5T1J6 154 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 LCN10Q6JVE6 187 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 TIGD7Q6NT04 549 aaPredicted RBP15.5■□□□□ 0.07
SNCA-205ENST00000394991 TRAM1L1Q8N609 369 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 SLC38A9Q8NBW4 561 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 FAM71BQ8TC56 605 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 MR1Q95460 341 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 FATE1Q969F0 183 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 TSGA13Q96PP4 275 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 ZSCAN5AQ9BUG6 496 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 CHST8Q9H2A9 424 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 HAUS4Q9H6D7 363 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 NFKBIL1Q9UBC1 381 aaPredicted RBP15.5■□□□□ 0.07
SNCA-205ENST00000394991 TMPRSS11EQ9UL52 423 aa15.5■□□□□ 0.07
SNCA-205ENST00000394991 POLQO75417 2590 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 LRRC53A6NM62 1247 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 ZNF185O15231 689 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 SCRG1O75711 98 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 TMEM63AO94886 807 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 CBX6O95503 412 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 POU3F2P20265 443 aaPredicted RBP15.49■□□□□ 0.07
SNCA-205ENST00000394991 IDSP22304 550 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 FECHP22830 423 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 CCNCP24863 283 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 CD86P42081 329 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 ARSEP51690 589 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 ITGA1P56199 1179 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 KRT81Q14533 505 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 GPR19Q15760 415 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
SNCA-205ENST00000394991 IZUMO3Q5VZ72 239 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 BPHLQ86WA6 291 aaPredicted RBP15.49■□□□□ 0.07
SNCA-205ENST00000394991 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 SRRM1Q8IYB3 904 aaKnown RBP15.49■□□□□ 0.07
SNCA-205ENST00000394991 D2HGDHQ8N465 521 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 SNRNP40Q96DI7 357 aaKnown RBP15.49■□□□□ 0.07
SNCA-205ENST00000394991 BTBD6Q96KE9 485 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 ZFYVE1Q9HBF4 777 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 MYO6Q9UM54 1294 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 SHOC2Q9UQ13 582 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 APCP25054 2843 aa15.49■□□□□ 0.07
SNCA-205ENST00000394991 SSU72P8A0A1W2PR75 194 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 LRRC10BA6NIK2 292 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 A6NL46 340 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 VEGFDO43915 354 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 CDK14O94921 469 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 SLC4A1P02730 911 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 VARSP26640 1264 aaKnown RBP15.48■□□□□ 0.07
SNCA-205ENST00000394991 PDE1BQ01064 536 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 ASIC2Q16515 512 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 PRAMEF17Q5VTA0 474 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 PDPK2PQ6A1A2 396 aa15.48■□□□□ 0.07
SNCA-205ENST00000394991 TMC3Q7Z5M5 1100 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms